RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
TRIM16-201ENST00000336708 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
TRIM16-201ENST00000336708 WDR66Q8TBY9 1149 aa11.22□□□□□ -0.61
TRIM16-201ENST00000336708 NUP133Q8WUM0 1156 aa11.22□□□□□ -0.61
TRIM16-201ENST00000336708 ANKS1AQ92625 1134 aa11.22□□□□□ -0.61
TRIM16-201ENST00000336708 CLIC6Q96NY7 704 aa11.22□□□□□ -0.61
TRIM16-201ENST00000336708 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
TRIM16-201ENST00000336708 CNTNAP5Q8WYK1 1306 aa11.21□□□□□ -0.61
TRIM16-201ENST00000336708 PPP4CP60510 307 aa11.21□□□□□ -0.61
TRIM16-201ENST00000336708 KRBA2Q6ZNG9 492 aa11.21□□□□□ -0.61
TRIM16-201ENST00000336708 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
TRIM16-201ENST00000336708 TNFRSF25Q93038 417 aa11.21□□□□□ -0.61
TRIM16-201ENST00000336708 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.61
TRIM16-201ENST00000336708 TRPC5Q9UL62 973 aaPredicted RBP11.21□□□□□ -0.61
TRIM16-201ENST00000336708 SRPRBQ9Y5M8 271 aaKnown RBP11.21□□□□□ -0.61
TRIM16-201ENST00000336708 BRWD3Q6RI45 1802 aa11.21□□□□□ -0.61
TRIM16-201ENST00000336708 NRXN2Q9P2S2 1712 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 NEMFO60524 1076 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 EVX2Q03828 476 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 NR5A1Q13285 461 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 NPY5RQ15761 445 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 NT5DC1Q5TFE4 455 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 TAF3Q5VWG9 929 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 PRR5LQ6MZQ0 368 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 METTL16Q86W50 562 aaKnown RBP11.21□□□□□ -0.62
TRIM16-201ENST00000336708 CNBD1Q8NA66 436 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 OXER1Q8TDS5 423 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.21□□□□□ -0.62
TRIM16-201ENST00000336708 KCNH3Q9ULD8 1083 aa11.21□□□□□ -0.62
TRIM16-201ENST00000336708 V9GYY5 206 aaPredicted RBP11.21□□□□□ -0.62
TRIM16-201ENST00000336708 PLEKHA8P1O95397 391 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 CEP131Q9UPN4 1083 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 QSER1Q2KHR3 1735 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 SMTNL1A8MU46 457 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 PRDM1O75626 825 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 XBP1P17861 261 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 LONRF3Q496Y0 759 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 C12orf60Q5U649 245 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 CACTINQ8WUQ7 758 aaKnown RBP11.2□□□□□ -0.62
TRIM16-201ENST00000336708 HSD3B7Q9H2F3 369 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 PCDHB6Q9Y5E3 794 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 EP400Q96L91 3159 aa11.2□□□□□ -0.62
TRIM16-201ENST00000336708 GYS1P13807 737 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 GTF2F1P35269 517 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 PDE4BQ07343 736 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 LRRC8AQ8IWT6 810 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 DRC7Q8IY82 874 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 OSBPL5Q9H0X9 879 aaPredicted RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 QTRT2Q9H974 415 aaKnown RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 KCND1Q9NSA2 647 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 TCP11L1Q9NUJ3 509 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 IMPACTQ9P2X3 320 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 LDHBP07195 334 aaKnown RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 CYP2D6P10635 497 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 IL1R1P14778 569 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 KRT2P35908 639 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 GSTO1P78417 241 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 SLC27A3Q5K4L6 730 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 ZNF804AQ7Z570 1209 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 FOXP4Q8IVH2 680 aaPredicted RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 SEPT12Q8IYM1 358 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 SRBD1Q8N5C6 995 aaKnown RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 ANKRD31Q8N7Z5 1873 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 MYO1BO43795 1136 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 SARSP49591 514 aaKnown RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 AKAP17AQ02040 695 aaKnown RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 LRMPQ12912 555 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 SLC51AQ86UW1 340 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 CCDC82Q8N4S0 544 aa11.19□□□□□ -0.62
TRIM16-201ENST00000336708 C16orf45Q96MC5 204 aaPredicted RBP11.19□□□□□ -0.62
TRIM16-201ENST00000336708 HOXA10P31260 410 aaPredicted RBP11.18□□□□□ -0.62
TRIM16-201ENST00000336708 GPSM2P81274 684 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 GRIN1Q05586 938 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 PNOCQ13519 176 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 ZRSR1Q15695 479 aaKnown RBP11.18□□□□□ -0.62
TRIM16-201ENST00000336708 DGKHQ86XP1 1220 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 OGFRQ9NZT2 677 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 VPS54Q9P1Q0 977 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 ANKIB1Q9P2G1 1089 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 V9GY48 417 aaPredicted RBP11.18□□□□□ -0.62
TRIM16-201ENST00000336708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.18□□□□□ -0.62
TRIM16-201ENST00000336708 NMT2O60551 498 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 ATP2B4P23634 1241 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 CCDC178Q5BJE1 867 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 EARS2Q5JPH6 523 aaKnown RBP11.18□□□□□ -0.62
TRIM16-201ENST00000336708 SPATA20Q8TB22 786 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 CABP5Q9NP86 173 aa11.18□□□□□ -0.62
TRIM16-201ENST00000336708 ACTN4O43707 911 aaKnown RBP11.17□□□□□ -0.62
TRIM16-201ENST00000336708 BMP15O95972 392 aa11.17□□□□□ -0.62
TRIM16-201ENST00000336708 GRIK5Q16478 980 aa11.17□□□□□ -0.62
TRIM16-201ENST00000336708 PFKFB3Q16875 520 aaPredicted RBP11.17□□□□□ -0.62
TRIM16-201ENST00000336708 CNNM3Q8NE01 707 aa11.17□□□□□ -0.62
TRIM16-201ENST00000336708 SH3RF3Q8TEJ3 882 aaPredicted RBP11.17□□□□□ -0.62
TRIM16-201ENST00000336708 RTFDC1Q9BY42 306 aaPredicted RBP11.17□□□□□ -0.62
TRIM16-201ENST00000336708 ST7Q9NRC1 585 aa11.17□□□□□ -0.62
TRIM16-201ENST00000336708 IL17RBQ9NRM6 502 aa11.17□□□□□ -0.62
TRIM16-201ENST00000336708 MYH1P12882 1939 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms