RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 KRT2P35908 639 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 PIK3AP1Q6ZUJ8 805 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 MCM9Q9NXL9 1143 aa16.98■□□□□ 0.31
UBA1-201ENST00000335972 HIBADHP31937 336 aaKnown RBP16.97■□□□□ 0.31
UBA1-201ENST00000335972 TROAPQ12815 778 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 GRIK5Q16478 980 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 ACTN4O43707 911 aaKnown RBP16.97■□□□□ 0.31
UBA1-201ENST00000335972 MCM7P33993 719 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 FUT2Q10981 343 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 CPVLQ9H3G5 476 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 DCP1AQ9NPI6 582 aaPredicted RBP16.97■□□□□ 0.31
UBA1-201ENST00000335972 TSPY2A6NKD2 308 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 NLRP3Q96P20 1036 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 DESI2Q9BSY9 194 aa16.97■□□□□ 0.31
UBA1-201ENST00000335972 SRPRBQ9Y5M8 271 aaKnown RBP16.97■□□□□ 0.31
UBA1-201ENST00000335972 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
UBA1-201ENST00000335972 MAPK8IP1Q9UQF2 711 aa16.96■□□□□ 0.31
UBA1-201ENST00000335972 BCL9LQ86UU0 1499 aa16.96■□□□□ 0.31
UBA1-201ENST00000335972 FAM237AA0A1B0GTK4 181 aa16.96■□□□□ 0.31
UBA1-201ENST00000335972 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
UBA1-201ENST00000335972 VSTM4Q8IW00 320 aa16.96■□□□□ 0.31
UBA1-201ENST00000335972 PLIN2Q99541 437 aa16.96■□□□□ 0.31
UBA1-201ENST00000335972 CDCA7Q9BWT1 371 aaPredicted RBP16.96■□□□□ 0.31
UBA1-201ENST00000335972 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
UBA1-201ENST00000335972 CD44P16070 742 aaKnown RBP16.95■□□□□ 0.3
UBA1-201ENST00000335972 NGLY1Q96IV0 654 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 RTL9Q8NET4 1388 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 TEX33O43247 280 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 NLRP5P59047 1200 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 PTGDRQ13258 359 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 ZBTB9Q96C00 473 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
UBA1-201ENST00000335972 MYH13Q9UKX3 1938 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 ERCC6LQ2NKX8 1250 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 ANKIB1Q9P2G1 1089 aa16.95■□□□□ 0.3
UBA1-201ENST00000335972 ZPR1O75312 459 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
UBA1-201ENST00000335972 CTCFLQ8NI51 663 aaPredicted RBP16.94■□□□□ 0.3
UBA1-201ENST00000335972 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
UBA1-201ENST00000335972 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 FANCGO15287 622 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 XBP1P17861 261 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 MTF1Q14872 753 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 TMTC3Q6ZXV5 915 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 FBXO33Q7Z6M2 555 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 STAG2Q8N3U4 1231 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 DOCK2Q92608 1830 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 TTC38Q5R3I4 469 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 HOOK1Q9UJC3 728 aaKnown RBP16.94■□□□□ 0.3
UBA1-201ENST00000335972 ANAPC4Q9UJX5 808 aa16.94■□□□□ 0.3
UBA1-201ENST00000335972 CBFA2T2O43439 604 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 MORC3Q14149 939 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 NPY5RQ15761 445 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 EPC1Q9H2F5 836 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 GOLGA8HP0CJ92 632 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 TOGARAM2Q6ZUX3 1019 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 PAGE5Q96GU1 130 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 CRNKL1Q9BZJ0 848 aaKnown RBP16.93■□□□□ 0.3
UBA1-201ENST00000335972 PRPF3O43395 683 aaKnown RBP16.93■□□□□ 0.3
UBA1-201ENST00000335972 NRDCO43847 1150 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 TFAP4Q01664 338 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 NFIXQ14938 502 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 KARSQ15046 597 aaKnown RBP16.93■□□□□ 0.3
UBA1-201ENST00000335972 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 CEP131Q9UPN4 1083 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 THRAP3Q9Y2W1 955 aaKnown RBP16.93■□□□□ 0.3
UBA1-201ENST00000335972 PHLPP1O60346 1717 aa16.93■□□□□ 0.3
UBA1-201ENST00000335972 A0A0U1RQJ8 604 aa16.92■□□□□ 0.3
UBA1-201ENST00000335972 USP5P45974 858 aa16.92■□□□□ 0.3
UBA1-201ENST00000335972 KMT5BQ4FZB7 885 aa16.92■□□□□ 0.3
UBA1-201ENST00000335972 ATRIPQ8WXE1 791 aa16.92■□□□□ 0.3
UBA1-201ENST00000335972 CNTNAP5Q8WYK1 1306 aa16.92■□□□□ 0.3
UBA1-201ENST00000335972 ARAP2Q8WZ64 1704 aa16.92■□□□□ 0.3
UBA1-201ENST00000335972 URI1O94763 535 aaPredicted RBP16.92■□□□□ 0.3
UBA1-201ENST00000335972 DPYDQ12882 1025 aa16.92■□□□□ 0.3
UBA1-201ENST00000335972 SLU7O95391 586 aaKnown RBP16.92■□□□□ 0.3
UBA1-201ENST00000335972 SH3RF3Q8TEJ3 882 aaPredicted RBP16.92■□□□□ 0.3
UBA1-201ENST00000335972 CCT6AP40227 531 aaKnown RBP16.91■□□□□ 0.3
UBA1-201ENST00000335972 SARSP49591 514 aaKnown RBP16.91■□□□□ 0.3
UBA1-201ENST00000335972 FBXO38Q6PIJ6 1188 aa16.91■□□□□ 0.3
UBA1-201ENST00000335972 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
UBA1-201ENST00000335972 IRX2Q9BZI1 471 aaPredicted RBP16.91■□□□□ 0.3
UBA1-201ENST00000335972 MYH6P13533 1939 aa16.91■□□□□ 0.3
UBA1-201ENST00000335972 PP2D1A8MPX8 630 aa16.91■□□□□ 0.3
UBA1-201ENST00000335972 IL17AQ16552 155 aa16.91■□□□□ 0.3
UBA1-201ENST00000335972 ARHGEF1Q92888 912 aaKnown RBP16.91■□□□□ 0.3
UBA1-201ENST00000335972 CACNA1SQ13698 1873 aa16.91■□□□□ 0.3
UBA1-201ENST00000335972 BCORQ6W2J9 1755 aa16.91■□□□□ 0.3
UBA1-201ENST00000335972 MAPKAPK5Q8IW41 473 aa16.9■□□□□ 0.3
UBA1-201ENST00000335972 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
UBA1-201ENST00000335972 CCNL1Q9UK58 526 aaPredicted RBP16.9■□□□□ 0.3
UBA1-201ENST00000335972 ZHX1Q9UKY1 873 aaPredicted RBP16.9■□□□□ 0.3
UBA1-201ENST00000335972 STX8Q9UNK0 236 aa16.9■□□□□ 0.3
UBA1-201ENST00000335972 CTNND2Q9UQB3 1225 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms