RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TMTC3Q6ZXV5 915 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 KIF18AQ8NI77 898 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 DCP1AQ9NPI6 582 aaPredicted RBP20.25■□□□□ 0.83
LRCH3-201ENST00000334859 NARFQ9UHQ1 456 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 TMEM232C9JQI7 657 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 ACTN4O43707 911 aaKnown RBP20.25■□□□□ 0.83
LRCH3-201ENST00000334859 MYO1BO43795 1136 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 FGRP09769 529 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 CTCFLQ8NI51 663 aaPredicted RBP20.25■□□□□ 0.83
LRCH3-201ENST00000334859 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
LRCH3-201ENST00000334859 KIF2AO00139 706 aaPredicted RBP20.24■□□□□ 0.83
LRCH3-201ENST00000334859 NPHP1O15259 732 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 TOP1P11387 765 aaKnown RBP20.24■□□□□ 0.83
LRCH3-201ENST00000334859 SLC4A8Q2Y0W8 1093 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 KANK3Q6NY19 840 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 TRMT44Q8IYL2 757 aaKnown RBP20.24■□□□□ 0.83
LRCH3-201ENST00000334859 DHX58Q96C10 678 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.24■□□□□ 0.83
LRCH3-201ENST00000334859 DLEC1Q9Y238 1755 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 CYP2D6P10635 497 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 FMR1Q06787 632 aaKnown RBP eCLIP20.24■□□□□ 0.83
LRCH3-201ENST00000334859 NT5DC1Q5TFE4 455 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 VSTM4Q8IW00 320 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 MLKLQ8NB16 471 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 NOL10Q9BSC4 688 aaKnown RBP20.24■□□□□ 0.83
LRCH3-201ENST00000334859 NFE2L3Q9Y4A8 694 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 LAMB1P07942 1786 aa20.24■□□□□ 0.83
LRCH3-201ENST00000334859 CNTNAP5Q8WYK1 1306 aa20.23■□□□□ 0.83
LRCH3-201ENST00000334859 ORC4O43929 436 aa20.23■□□□□ 0.83
LRCH3-201ENST00000334859 PDS5AQ29RF7 1337 aaKnown RBP20.23■□□□□ 0.83
LRCH3-201ENST00000334859 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
LRCH3-201ENST00000334859 CDK11BP21127 795 aaKnown RBP20.23■□□□□ 0.83
LRCH3-201ENST00000334859 KCNJ6P48051 423 aa20.23■□□□□ 0.83
LRCH3-201ENST00000334859 MORC3Q14149 939 aa20.23■□□□□ 0.83
LRCH3-201ENST00000334859 NAA30Q147X3 362 aaPredicted RBP20.23■□□□□ 0.83
LRCH3-201ENST00000334859 SYCP1Q15431 976 aa20.23■□□□□ 0.83
LRCH3-201ENST00000334859 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
LRCH3-201ENST00000334859 CCDC34Q96HJ3 373 aa20.23■□□□□ 0.83
LRCH3-201ENST00000334859 EPSTI1Q96J88 318 aa20.23■□□□□ 0.83
LRCH3-201ENST00000334859 C8orf37Q96NL8 207 aa20.23■□□□□ 0.83
LRCH3-201ENST00000334859 ARPP21Q9UBL0 812 aaPredicted RBP20.23■□□□□ 0.83
LRCH3-201ENST00000334859 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
LRCH3-201ENST00000334859 RGL2O15211 777 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 TPTE2Q6XPS3 522 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 ATP8A2Q9NTI2 1148 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 TSPY2A6NKD2 308 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 WNT7AO00755 349 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 SARSP49591 514 aaKnown RBP20.22■□□□□ 0.83
LRCH3-201ENST00000334859 GOLGA8FQ08AF8 430 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 GOLGA8DPQ0D2H9 430 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 NOM1Q5C9Z4 860 aaKnown RBP20.22■□□□□ 0.83
LRCH3-201ENST00000334859 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
LRCH3-201ENST00000334859 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 SYMPKQ92797 1274 aaKnown RBP20.22■□□□□ 0.83
LRCH3-201ENST00000334859 INTS13Q9NVM9 706 aa20.22■□□□□ 0.83
LRCH3-201ENST00000334859 COL24A1Q17RW2 1714 aa20.21■□□□□ 0.83
LRCH3-201ENST00000334859 MAST2Q6P0Q8 1798 aa20.21■□□□□ 0.83
LRCH3-201ENST00000334859 LTBP4Q8N2S1 1624 aa20.21■□□□□ 0.83
LRCH3-201ENST00000334859 BMP15O95972 392 aa20.21■□□□□ 0.83
LRCH3-201ENST00000334859 AFMP43652 599 aa20.21■□□□□ 0.83
LRCH3-201ENST00000334859 ZNF174Q15697 407 aa20.21■□□□□ 0.83
LRCH3-201ENST00000334859 TXNRD3Q86VQ6 643 aa20.21■□□□□ 0.83
LRCH3-201ENST00000334859 ZNF215Q9UL58 517 aaPredicted RBP20.21■□□□□ 0.83
LRCH3-201ENST00000334859 A0A087X0B3 334 aa20.2■□□□□ 0.82
LRCH3-201ENST00000334859 TTC38Q5R3I4 469 aa20.2■□□□□ 0.82
LRCH3-201ENST00000334859 FERMT2Q96AC1 680 aa20.2■□□□□ 0.82
LRCH3-201ENST00000334859 NGLY1Q96IV0 654 aa20.2■□□□□ 0.82
LRCH3-201ENST00000334859 MCM9Q9NXL9 1143 aa20.2■□□□□ 0.82
LRCH3-201ENST00000334859 CCDC88AQ3V6T2 1871 aa20.2■□□□□ 0.82
LRCH3-201ENST00000334859 RC3H1Q5TC82 1133 aaKnown RBP20.2■□□□□ 0.82
LRCH3-201ENST00000334859 HOMER1Q86YM7 354 aa20.2■□□□□ 0.82
LRCH3-201ENST00000334859 ENOX1Q8TC92 643 aaKnown RBP20.2■□□□□ 0.82
LRCH3-201ENST00000334859 KIAA1551Q9HCM1 1747 aa20.19■□□□□ 0.82
LRCH3-201ENST00000334859 PLCD1P51178 756 aa20.19■□□□□ 0.82
LRCH3-201ENST00000334859 NPY5RQ15761 445 aa20.19■□□□□ 0.82
LRCH3-201ENST00000334859 SYT10Q6XYQ8 523 aa20.19■□□□□ 0.82
LRCH3-201ENST00000334859 CCNL1Q9UK58 526 aaPredicted RBP20.19■□□□□ 0.82
LRCH3-201ENST00000334859 RTCBQ9Y3I0 505 aaKnown RBP20.19■□□□□ 0.82
LRCH3-201ENST00000334859 VWA3AA6NCI4 1184 aa20.19■□□□□ 0.82
LRCH3-201ENST00000334859 SCG2P13521 617 aa20.19■□□□□ 0.82
LRCH3-201ENST00000334859 NLRP5P59047 1200 aa20.19■□□□□ 0.82
LRCH3-201ENST00000334859 TNFRSF25Q93038 417 aa20.19■□□□□ 0.82
LRCH3-201ENST00000334859 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.19■□□□□ 0.82
LRCH3-201ENST00000334859 V9GYY5 206 aaPredicted RBP20.19■□□□□ 0.82
LRCH3-201ENST00000334859 CCP110O43303 1012 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 SLFN14P0C7P3 912 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 ZNF18P17022 549 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 ANKIB1Q9P2G1 1089 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 MORC2Q9Y6X9 1032 aaPredicted RBP20.18■□□□□ 0.82
LRCH3-201ENST00000334859 BTAF1O14981 1849 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 USP17L8P0C7I0 530 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 CASP1P29466 404 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 PTGDRQ13258 359 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 SBK1Q52WX2 424 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 KLHL10Q6JEL2 608 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 PIK3AP1Q6ZUJ8 805 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 SPATA20Q8TB22 786 aa20.18■□□□□ 0.82
LRCH3-201ENST00000334859 VPS72Q15906 364 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms