RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 USP17L2Q6R6M4 530 aa13.53□□□□□ -0.24
C9orf85-201ENST00000334731 YTHDC1Q96MU7 727 aaKnown RBP13.53□□□□□ -0.24
C9orf85-201ENST00000334731 PUS7LQ9H0K6 701 aaKnown RBP13.53□□□□□ -0.24
C9orf85-201ENST00000334731 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
C9orf85-201ENST00000334731 ATP8A2Q9NTI2 1148 aa13.53□□□□□ -0.24
C9orf85-201ENST00000334731 MORF4L1Q9UBU8 362 aa13.53□□□□□ -0.24
C9orf85-201ENST00000334731 ADCY3O60266 1144 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
C9orf85-201ENST00000334731 TSHZ3Q63HK5 1081 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 ACER1Q8TDN7 264 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 COA7Q96BR5 231 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 C12orf42Q96LP6 360 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 KIAA1683Q9H0B3 1180 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 FOCADQ5VW36 1801 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 CDK5RAP2Q96SN8 1893 aa13.52□□□□□ -0.25
C9orf85-201ENST00000334731 TNRC18O15417 2968 aaPredicted RBP13.52□□□□□ -0.25
C9orf85-201ENST00000334731 PTPRFP10586 1907 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 PEX10O60683 326 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 HERVK_113P62684 666 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 IRF5Q13568 498 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 C12orf60Q5U649 245 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 POTEEQ6S8J3 1075 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 SLC44A5Q8NCS7 719 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 PXYLP1Q8TE99 480 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 DYNLL2Q96FJ2 89 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 GPATCH3Q96I76 525 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 TXNRD2Q9NNW7 524 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 RBPJLQ9UBG7 517 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 BIN2Q9UBW5 565 aaPredicted RBP13.51□□□□□ -0.25
C9orf85-201ENST00000334731 GJD2Q9UKL4 321 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
C9orf85-201ENST00000334731 CYP2D7A0A087X1C5 515 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L21D6R901 530 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 SMIM22K7EJ46 135 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 CCL5P13501 91 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 ELNP15502 786 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 USP14P54578 494 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 UBXN2AP68543 259 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 SEPT2Q15019 361 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 ZYXQ15942 572 aaKnown RBP13.5□□□□□ -0.25
C9orf85-201ENST00000334731 PRPF38BQ5VTL8 546 aaKnown RBP13.5□□□□□ -0.25
C9orf85-201ENST00000334731 GPRC5AQ8NFJ5 357 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 STRBPQ96SI9 672 aaKnown RBP13.5□□□□□ -0.25
C9orf85-201ENST00000334731 FEZ1Q99689 392 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 SWAP70Q9UH65 585 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 LOC285556D6RIA3 1793 aa13.5□□□□□ -0.25
C9orf85-201ENST00000334731 KIAA0100Q14667 2235 aaKnown RBP13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 MPHOSPH10O00566 681 aaKnown RBP13.49□□□□□ -0.25
C9orf85-201ENST00000334731 RNF113AO15541 343 aaKnown RBP13.49□□□□□ -0.25
C9orf85-201ENST00000334731 GJB1P08034 283 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 Q3C1V9 767 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 CATSPERGQ6ZRH7 1159 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 OTUD7AQ8TE49 926 aaPredicted RBP13.49□□□□□ -0.25
C9orf85-201ENST00000334731 OSBP2Q969R2 916 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 RNF208Q9H0X6 261 aa13.49□□□□□ -0.25
C9orf85-201ENST00000334731 ATAD5Q96QE3 1844 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 CENPFP49454 3210 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 TTC41PQ6P2S7 1318 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 A0A1W2PRG0 241 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 INHAP05111 366 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 VCAM1P19320 739 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 CDK8P49336 464 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 SIAH1Q8IUQ4 282 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 PI4K2BQ8TCG2 481 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 GTF3C2Q8WUA4 911 aaPredicted RBP13.48□□□□□ -0.25
C9orf85-201ENST00000334731 KIF12Q96FN5 646 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 UNC93B1Q9H1C4 597 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
C9orf85-201ENST00000334731 MYH1P12882 1939 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 GSG1L2A8MUP6 293 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 ERC2O15083 957 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 AKR1B1P15121 316 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 GJA8P48165 433 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 NUBP1P53384 320 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 ERVK-9P63128 1117 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 ERVK-24P63145 666 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 ASTLQ6HA08 431 aaPredicted RBP13.47□□□□□ -0.25
C9orf85-201ENST00000334731 AMOTL1Q8IY63 956 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 APPBP2Q92624 585 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 SHISA4Q96DD7 197 aa13.47□□□□□ -0.25
C9orf85-201ENST00000334731 CCDC17Q96LX7 622 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms