RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IL15P40933 162 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-201ENST00000334504 RPS6KA2Q15349 733 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 PTPROQ16827 1216 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 FCHSD1Q86WN1 690 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 LRRC8CQ8TDW0 803 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 HAUS1Q96CS2 278 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 PPP1R13BQ96KQ4 1090 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 HAUS8Q9BT25 410 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ZBTB40Q9NUA8 1239 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 KRT3P12035 628 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 HARSP12081 509 aaKnown RBP10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ETF1P62495 437 aaKnown RBP10.82□□□□□ -0.68
COL4A6-201ENST00000334504 PDCD2Q16342 344 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ANKRD20A4Q4UJ75 823 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ANKRD20A8PQ5CZ79 823 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ANKRD20A2Q5SQ80 823 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ANKRD20A1Q5TYW2 823 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 LMBR1LQ6UX01 489 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 AMOTL2Q9Y2J4 779 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 SBNO1A3KN83 1393 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 NSD2O96028 1365 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 WDR46O15213 610 aaKnown RBP10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ATP8B1O43520 1251 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ATICP31939 592 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 TFCP2Q12800 502 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 GJA3Q9Y6H8 435 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 SUPT6HQ7KZ85 1726 aaKnown RBP10.82□□□□□ -0.68
COL4A6-201ENST00000334504 TRPA1O75762 1119 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 GUCY2CP25092 1073 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 HNRNPH2P55795 449 aaKnown RBP10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ZKSCAN8Q15776 578 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-201ENST00000334504 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 TBC1D7Q9P0N9 293 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 HECW1Q76N89 1606 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 PHBP35232 272 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 IFNAR2P48551 515 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 APBA1Q02410 837 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 CUL4BQ13620 913 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 ZC4H2Q9NQZ6 224 aa10.82□□□□□ -0.68
COL4A6-201ENST00000334504 DEXIO95424 95 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 NBPF14Q5TI25 921 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 U2AF1L4Q8WU68 220 aaKnown RBP10.81□□□□□ -0.68
COL4A6-201ENST00000334504 THAP12O43422 761 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 ADCY8P40145 1251 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 CCDC152Q4G0S7 254 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 ICE2Q659A1 982 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 RNF34Q969K3 372 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 LRGUKQ96M69 825 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 LSM14BQ9BX40 385 aaKnown RBP10.81□□□□□ -0.68
COL4A6-201ENST00000334504 NLRC4Q9NPP4 1024 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 TTC21BQ7Z4L5 1316 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 MAP3K7O43318 606 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 ALDH1L1O75891 902 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 GABPB2Q8TAK5 448 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-201ENST00000334504 RABGGTAQ92696 567 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 RCN2Q14257 317 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 XAGE3Q8WTP9 111 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 INTS9Q9NV88 658 aaKnown RBP10.81□□□□□ -0.68
COL4A6-201ENST00000334504 KDM2BQ8NHM5 1336 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 CREB3O43889 395 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 DCUN1D2Q6PH85 259 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 DYMQ7RTS9 669 aa10.81□□□□□ -0.68
COL4A6-201ENST00000334504 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.81□□□□□ -0.68
COL4A6-201ENST00000334504 SART1O43290 800 aaKnown RBP10.8□□□□□ -0.68
COL4A6-201ENST00000334504 IL1RL1Q01638 556 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 SCYL3Q8IZE3 742 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 HELLSQ9NRZ9 838 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 PKD2L1Q9P0L9 805 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 SCINQ9Y6U3 715 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 RALGAPBQ86X10 1494 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 GUCY2DQ02846 1103 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 ADAT2Q7Z6V5 191 aaKnown RBP10.8□□□□□ -0.68
COL4A6-201ENST00000334504 SDCCAG3Q96C92 435 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 YY1AP1Q9H869 796 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 EVI5O60447 810 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 NAP1L4Q99733 375 aaKnown RBP10.8□□□□□ -0.68
COL4A6-201ENST00000334504 B4E1Z4 1266 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 CSPG5O95196 566 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 SNRPA1P09661 255 aaKnown RBP10.8□□□□□ -0.68
COL4A6-201ENST00000334504 TXKP42681 527 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 ESRRGP62508 458 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 BSPRYQ5W0U4 402 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 NELFCDQ8IXH7 590 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 STAMQ92783 540 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 SERTAD1Q9UHV2 236 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 KCNJ18B7U540 433 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 CHMP2AO43633 222 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 KCNJ12Q14500 433 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 OTUD7AQ8TE49 926 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-201ENST00000334504 RSAD2Q8WXG1 361 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 CCDC169A6NNP5 214 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 SLC12A2P55011 1212 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 JADE1Q6IE81 842 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 MCM9Q9NXL9 1143 aa10.8□□□□□ -0.68
COL4A6-201ENST00000334504 PARP1P09874 1014 aaKnown RBP10.79□□□□□ -0.68
COL4A6-201ENST00000334504 RANBP1P43487 201 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms