RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 PPP2R3BQ9Y5P8 575 aa14.14□□□□□ -0.15
TRIM49B-201ENST00000332682 IQCA1LA6NCM1 817 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 GOLGA8AA7E2F4 631 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 POTECB2RU33 542 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 DTNBO60941 627 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 DDAH1O94760 285 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 GDF11O95390 407 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 CTDNEP1O95476 244 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 TROAPQ12815 778 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 SYNE3Q6ZMZ3 975 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 CATIPQ7Z7H3 387 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 CLEC10AQ8IUN9 316 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 NSUN7Q8NE18 718 aaKnown RBP14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 LLPHQ9BRT6 129 aaKnown RBP14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 TAF1DQ9H5J8 278 aaPredicted RBP14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 FAM217BQ9NTX9 383 aaPredicted RBP14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 MYH4Q9Y623 1939 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 SSC5DA1L4H1 1573 aa14.13□□□□□ -0.15
TRIM49B-201ENST00000332682 MPHOSPH10O00566 681 aaKnown RBP14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 JAK2O60674 1132 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 CDC27P30260 824 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 JAG1P78504 1218 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 ABCB5Q2M3G0 1257 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 NBPF12Q5TAG4 269 aaPredicted RBP14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 TMEM179Q6ZVK1 233 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 CCDC144CPQ8IYA2 1237 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 TMEM47Q9BQJ4 181 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 KAT14Q9H8E8 782 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 SMC3Q9UQE7 1217 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 ATAD5Q96QE3 1844 aa14.12□□□□□ -0.15
TRIM49B-201ENST00000332682 DHX16O60231 1041 aaKnown RBP14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 CALM1P0DP23 149 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 CALM2P0DP24 149 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 CALM3P0DP25 149 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 GUCY1A2P33402 732 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 RTN1Q16799 776 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 FANCBQ8NB91 859 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 PNMA1Q8ND90 353 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 SMARCC2Q8TAQ2 1214 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 ZC3H15Q8WU90 426 aaKnown RBP14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 NUP133Q8WUM0 1156 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
TRIM49B-201ENST00000332682 PTPDC1A2A3K4 754 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 PHF20L1A8MW92 1017 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 TTLL1O95922 423 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 GH2P01242 217 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 TOP1P11387 765 aaKnown RBP14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 GJB2P29033 226 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 ADD1P35611 737 aaKnown RBP14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 SEPT2Q15019 361 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 PRAMEF18Q5VWM3 479 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 DCPSQ96C86 337 aaKnown RBP14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 KANSL2Q9H9L4 492 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 CPLX1O14810 134 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 PPP2R5BQ15173 497 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 NTRK3Q16288 839 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 PPP4R3BQ5MIZ7 849 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 SULF1Q8IWU6 871 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 HOOK2Q96ED9 719 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 CHMP5Q9NZZ3 219 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 ZBTB21Q9ULJ3 1066 aa14.1□□□□□ -0.15
TRIM49B-201ENST00000332682 DOCK1Q14185 1865 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 CCDC196A0A1B0GTZ2 297 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 ADM5C9JUS6 153 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 CAP2P40123 477 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 HMGN5P82970 282 aaKnown RBP14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 ICA1Q05084 483 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 PKP1Q13835 747 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 DCAF15Q66K64 600 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 KRT26Q7Z3Y9 468 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 PNMA8AQ86V59 439 aaPredicted RBP14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 LRRC47Q8N1G4 583 aaKnown RBP14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 DDX11Q96FC9 970 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 MAP3K14Q99558 947 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 CABP5Q9NP86 173 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 NYAP2Q9P242 653 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 CLIP2Q9UDT6 1046 aa14.09□□□□□ -0.15
TRIM49B-201ENST00000332682 PAPPA2Q9BXP8 1791 aa14.08□□□□□ -0.15
TRIM49B-201ENST00000332682 PPFIA3O75145 1194 aa14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 CDKL5O76039 1030 aa14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 IFNAR1P17181 557 aa14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 GRM4Q14833 912 aa14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 RAB3GAP1Q15042 981 aa14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 EAPPQ56P03 285 aaPredicted RBP14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 CPLX2Q6PUV4 134 aaKnown RBP14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 RASGRP2Q7LDG7 609 aa14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 SIAH1Q8IUQ4 282 aa14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 CTCFLQ8NI51 663 aaPredicted RBP14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 RBM28Q9NW13 759 aaKnown RBP14.08□□□□□ -0.16
TRIM49B-201ENST00000332682 FDPSP14324 419 aaKnown RBP14.07□□□□□ -0.16
TRIM49B-201ENST00000332682 KIF5BP33176 963 aa14.07□□□□□ -0.16
TRIM49B-201ENST00000332682 SUPT20HL1Q3ZLR7 823 aa14.07□□□□□ -0.16
TRIM49B-201ENST00000332682 DLK2Q6UY11 383 aa14.07□□□□□ -0.16
TRIM49B-201ENST00000332682 TMTC3Q6ZXV5 915 aa14.07□□□□□ -0.16
TRIM49B-201ENST00000332682 MKL1Q969V6 931 aa14.07□□□□□ -0.16
TRIM49B-201ENST00000332682 ZNF341Q9BYN7 854 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms