RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 ARID4AP29374 1257 aaPredicted RBP13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 DNA2P51530 1060 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 DDB1Q16531 1140 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 VGLL2Q8N8G2 317 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 TC2NQ8N9U0 490 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 CCDC87Q9NVE4 849 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 UBXN1Q04323 297 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 HEATR3Q7Z4Q2 680 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 DZIP1Q86YF9 867 aaKnown RBP13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 A0A087X0B3 334 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 GOLGA8HP0CJ92 632 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 TXLNAP40222 546 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 PLA2G12BQ9BX93 195 aa13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.38□□□□□ -0.27
EFCAB13-201ENST00000331493 STAT6P42226 847 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 TNNT3P45378 269 aaPredicted RBP13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 LMAN1P49257 510 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 PLCD1P51178 756 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 FKBP15Q5T1M5 1219 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 FAM182BQ5T319 152 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 PAGE5Q96GU1 130 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 DRC1Q96MC2 740 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 SAP30BPQ9UHR5 308 aaKnown RBP13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 TFR2Q9UP52 801 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 CCDC194A0A1B0GVG4 234 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 ENC1O14682 589 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 KRT9P35527 623 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 GABPB1Q06547 395 aaPredicted RBP13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 GDAQ9Y2T3 454 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 LAMA4Q16363 1823 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 PP2D1A8MPX8 630 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 SLFN14P0C7P3 912 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 ERFEQ4G0M1 354 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 PARD6BQ9BYG5 372 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
EFCAB13-201ENST00000331493 CCDC66A2RUB6 948 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 STX10O60499 249 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 OAS2P29728 719 aaKnown RBP13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 UBA7P41226 1012 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 CAGE1Q8TC20 777 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 ENOX1Q8TC92 643 aaKnown RBP13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 ANKIB1Q9P2G1 1089 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 TRIM49BA6NDI0 452 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 KLRK1P26718 216 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 IL6STP40189 918 aaPredicted RBP13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 CHMP4BP1P59074 171 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 CUL4BQ13620 913 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 ENOX2Q16206 610 aaKnown RBP13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 IQUBQ8NA54 791 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 STAG1Q8WVM7 1258 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 GOLGA1Q92805 767 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 TRIM47Q96LD4 638 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 CDHR2Q9BYE9 1310 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 GOLGB1Q14789 3259 aaKnown RBP13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 SCN11AQ9UI33 1791 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 KCNQ2O43526 872 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 PRDX5P30044 214 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 SIK1P57059 783 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 KAT14Q9H8E8 782 aa13.36□□□□□ -0.27
EFCAB13-201ENST00000331493 MARCH6O60337 910 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 RAD9BQ6WBX8 426 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 SLC35F6Q8N357 371 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 FBXL16Q8N461 479 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 DYNLL2Q96FJ2 89 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 GPR101Q96P66 508 aaPredicted RBP13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 L2HGDHQ9H9P8 463 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 MORC3Q14149 939 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 SPATA1Q5VX52 437 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 KIAA1328Q86T90 577 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 NELFBQ8WX92 580 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 MAGEC2Q9UBF1 373 aaPredicted RBP13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 MRC1P22897 1456 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 EFCAB8A8MWE9 144 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 FANCGO15287 622 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 TADA3O75528 432 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 USP17L8P0C7I0 530 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 CELF1Q92879 486 aaKnown RBP13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 SUGCTQ9HAC7 445 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 PHLPP2Q6ZVD8 1323 aa13.35□□□□□ -0.27
EFCAB13-201ENST00000331493 MATR3P43243 847 aaKnown RBP eCLIP13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 FXR1P51114 621 aaKnown RBP eCLIP13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 NAP1L1P55209 391 aaKnown RBP13.34□□□□□ -0.27
EFCAB13-201ENST00000331493 TFAP4Q01664 338 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms