RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 DDNO94850 711 aaPredicted RBP18.29■□□□□ 0.52
PDGFB-201ENST00000331163 SLC1A4P43007 532 aa18.29■□□□□ 0.52
PDGFB-201ENST00000331163 NAPAP54920 295 aa18.29■□□□□ 0.52
PDGFB-201ENST00000331163 PAXIP1Q6ZW49 1069 aaPredicted RBP18.29■□□□□ 0.52
PDGFB-201ENST00000331163 TMTC2Q8N394 836 aa18.29■□□□□ 0.52
PDGFB-201ENST00000331163 CNOT7Q9UIV1 285 aaKnown RBP18.29■□□□□ 0.52
PDGFB-201ENST00000331163 A0A087WWV3 80 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 LMOD1P29536 600 aaPredicted RBP18.28■□□□□ 0.52
PDGFB-201ENST00000331163 ZNF445P59923 1031 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 EXOSC10Q01780 885 aaKnown RBP18.28■□□□□ 0.52
PDGFB-201ENST00000331163 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 C12orf60Q5U649 245 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 DIS3L2Q8IYB7 885 aaKnown RBP18.28■□□□□ 0.52
PDGFB-201ENST00000331163 MAP7D2Q96T17 732 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 SPDYE4A6NLX3 237 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.28■□□□□ 0.52
PDGFB-201ENST00000331163 KLRF2D3W0D1 207 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 BRD1O95696 1058 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 PARP1P09874 1014 aaKnown RBP18.28■□□□□ 0.52
PDGFB-201ENST00000331163 CUL4AQ13619 759 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 TTC12Q9H892 705 aaPredicted RBP18.28■□□□□ 0.52
PDGFB-201ENST00000331163 TACC3Q9Y6A5 838 aa18.28■□□□□ 0.52
PDGFB-201ENST00000331163 JAKMIP3Q5VZ66 844 aa18.27■□□□□ 0.52
PDGFB-201ENST00000331163 IL1R1P14778 569 aa18.27■□□□□ 0.52
PDGFB-201ENST00000331163 ST3GAL1Q11201 340 aa18.27■□□□□ 0.52
PDGFB-201ENST00000331163 SYAP1Q96A49 352 aaPredicted RBP18.27■□□□□ 0.52
PDGFB-201ENST00000331163 USP25Q9UHP3 1055 aa18.27■□□□□ 0.52
PDGFB-201ENST00000331163 PLS1Q14651 629 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 ZNF174Q15697 407 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 SASS6Q6UVJ0 657 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 STAG1Q8WVM7 1258 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 ZNF396Q96N95 335 aaPredicted RBP18.26■□□□□ 0.51
PDGFB-201ENST00000331163 EGFRP00533 1210 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 CCDC125Q86Z20 511 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 ZNF274Q96GC6 653 aaPredicted RBP18.26■□□□□ 0.51
PDGFB-201ENST00000331163 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
PDGFB-201ENST00000331163 ICA1Q05084 483 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 FCHSD1Q86WN1 690 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
PDGFB-201ENST00000331163 ASTN2O75129 1339 aaPredicted RBP18.26■□□□□ 0.51
PDGFB-201ENST00000331163 A0A1B0GVL5 298 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 TAL1P17542 331 aaPredicted RBP18.25■□□□□ 0.51
PDGFB-201ENST00000331163 MCM7P33993 719 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 DACT2Q5SW24 774 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 LRSAM1Q6UWE0 723 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 ILDR2Q71H61 639 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 KIFC2Q96AC6 838 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
PDGFB-201ENST00000331163 CCDC194A0A1B0GVG4 234 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 USP17L5A8MUK1 530 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 TNNI2P48788 182 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 RSBN1LQ6PCB5 846 aaPredicted RBP18.25■□□□□ 0.51
PDGFB-201ENST00000331163 TMEM47Q9BQJ4 181 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 GPR75-ASB3A0A0A6YYF3 556 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 RASA3Q14644 834 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 ABCB5Q2M3G0 1257 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 FSIP1Q8NA03 581 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 COA7Q96BR5 231 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 USP28Q96RU2 1077 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 PRDM4Q9UKN5 801 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 TJP1Q07157 1748 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
PDGFB-201ENST00000331163 TNIP1Q15025 636 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 TSPY26PQ9H489 355 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 CFAP45Q9UL16 551 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 ADAMTS7Q9UKP4 1686 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 KINO60870 393 aaKnown RBP18.24■□□□□ 0.51
PDGFB-201ENST00000331163 CTDNEP1O95476 244 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 SSBP05455 408 aaKnown RBP eCLIP18.24■□□□□ 0.51
PDGFB-201ENST00000331163 APOBEC3HQ6NTF7 200 aaKnown RBP18.24■□□□□ 0.51
PDGFB-201ENST00000331163 DRC7Q8IY82 874 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 DACT1Q9NYF0 836 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 PKD2L1Q9P0L9 805 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 BRWD3Q6RI45 1802 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 HSP90AA4PQ58FG1 418 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 TTBK2Q6IQ55 1244 aa18.24■□□□□ 0.51
PDGFB-201ENST00000331163 DYNC1I1O14576 645 aa18.23■□□□□ 0.51
PDGFB-201ENST00000331163 ZNF500O60304 480 aaPredicted RBP18.23■□□□□ 0.51
PDGFB-201ENST00000331163 WDHD1O75717 1129 aaPredicted RBP18.23■□□□□ 0.51
PDGFB-201ENST00000331163 TANGO6Q9C0B7 1094 aa18.23■□□□□ 0.51
PDGFB-201ENST00000331163 OSBPL5Q9H0X9 879 aaPredicted RBP18.23■□□□□ 0.51
PDGFB-201ENST00000331163 TNMDQ9H2S6 317 aa18.23■□□□□ 0.51
PDGFB-201ENST00000331163 PI4KBQ9UBF8 816 aa18.23■□□□□ 0.51
PDGFB-201ENST00000331163 ANGEL2Q5VTE6 544 aaKnown RBP18.22■□□□□ 0.51
PDGFB-201ENST00000331163 WASF1Q92558 559 aa18.22■□□□□ 0.51
PDGFB-201ENST00000331163 STAMQ92783 540 aa18.22■□□□□ 0.51
PDGFB-201ENST00000331163 RPAP1Q9BWH6 1393 aaPredicted RBP18.22■□□□□ 0.51
PDGFB-201ENST00000331163 ZMYM6O95789 1325 aa18.22■□□□□ 0.51
PDGFB-201ENST00000331163 RASA1P20936 1047 aa18.22■□□□□ 0.51
PDGFB-201ENST00000331163 SPC24Q8NBT2 197 aa18.22■□□□□ 0.51
PDGFB-201ENST00000331163 OXER1Q8TDS5 423 aa18.22■□□□□ 0.51
PDGFB-201ENST00000331163 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
PDGFB-201ENST00000331163 VEGFAP15692 232 aaPredicted RBP18.22■□□□□ 0.51
PDGFB-201ENST00000331163 BIN2Q9UBW5 565 aaPredicted RBP18.22■□□□□ 0.51
PDGFB-201ENST00000331163 MRVI1Q9Y6F6 885 aa18.22■□□□□ 0.51
PDGFB-201ENST00000331163 TMEM232C9JQI7 657 aa18.21■□□□□ 0.51
PDGFB-201ENST00000331163 EPB41L2O43491 1005 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms