RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 AATFQ9NY61 560 aaKnown RBP eCLIP11.48□□□□□ -0.573e-6■■■■■ 41.7
RARB-201ENST00000330688 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 TAF1P21675 1872 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 LAMB2P55268 1798 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 GTF2E1P29083 439 aaPredicted RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 MECOMQ03112 1051 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 TBX2Q13207 712 aaPredicted RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 DHX58Q96C10 678 aa11.48□□□□□ -0.57
RARB-201ENST00000330688 SAMSN1Q9NSI8 373 aaKnown RBP11.48□□□□□ -0.57
RARB-201ENST00000330688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.48□□□□□ -0.57
RARB-201ENST00000330688 CCDC93Q567U6 631 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 SLC10A5Q5PT55 438 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 KANK3Q6NY19 840 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 BARGINQ6ZT62 677 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 TMTC3Q6ZXV5 915 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 SRBD1Q8N5C6 995 aaKnown RBP11.47□□□□□ -0.57
RARB-201ENST00000330688 TRIML1Q8N9V2 468 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 TNFRSF25Q93038 417 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 RBM28Q9NW13 759 aaKnown RBP11.47□□□□□ -0.57
RARB-201ENST00000330688 TFCP2L1Q9NZI6 479 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 DUOX1Q9NRD9 1551 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
RARB-201ENST00000330688 CASP1P29466 404 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 RPS8P62241 208 aaKnown RBP11.47□□□□□ -0.57
RARB-201ENST00000330688 FAM47AQ5JRC9 791 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 REXO1L1PQ8IX06 675 aa11.47□□□□□ -0.57
RARB-201ENST00000330688 DCP1AQ9NPI6 582 aaPredicted RBP11.47□□□□□ -0.57
RARB-201ENST00000330688 MORC2Q9Y6X9 1032 aaPredicted RBP11.47□□□□□ -0.57
RARB-201ENST00000330688 VEGFAP15692 232 aaPredicted RBP11.46□□□□□ -0.57
RARB-201ENST00000330688 PRDX5P30044 214 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 AFMP43652 599 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 ETF1P62495 437 aaKnown RBP11.46□□□□□ -0.57
RARB-201ENST00000330688 ZNF174Q15697 407 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 ELF2Q15723 593 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 TRIM65Q6PJ69 517 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 HOMER1Q86YM7 354 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 LRRN4CLQ8ND94 238 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 SYMPKQ92797 1274 aaKnown RBP11.46□□□□□ -0.57
RARB-201ENST00000330688 FEZ1Q99689 392 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 DACH1Q9UI36 760 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 MYH2Q9UKX2 1941 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 FANCGO15287 622 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 CALM1P0DP23 149 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 CALM2P0DP24 149 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 CALM3P0DP25 149 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 CYP2D6P10635 497 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.57
RARB-201ENST00000330688 KMT5BQ4FZB7 885 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 PTF1AQ7RTS3 328 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
RARB-201ENST00000330688 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.58
RARB-201ENST00000330688 BAZ2AQ9UIF9 1905 aaKnown RBP11.46□□□□□ -0.58
RARB-201ENST00000330688 DDAH1O94760 285 aa11.46□□□□□ -0.58
RARB-201ENST00000330688 SLFN14P0C7P3 912 aa11.46□□□□□ -0.58
RARB-201ENST00000330688 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.58
RARB-201ENST00000330688 ZSCAN20P17040 1043 aaPredicted RBP11.46□□□□□ -0.58
RARB-201ENST00000330688 PLCD1P51178 756 aa11.46□□□□□ -0.58
RARB-201ENST00000330688 PAGE5Q96GU1 130 aa11.46□□□□□ -0.58
RARB-201ENST00000330688 NOL10Q9BSC4 688 aaKnown RBP11.46□□□□□ -0.58
RARB-201ENST00000330688 SRP68Q9UHB9 627 aaKnown RBP11.46□□□□□ -0.58
RARB-201ENST00000330688 DNAI1Q9UI46 699 aa11.46□□□□□ -0.58
RARB-201ENST00000330688 NRAPQ86VF7 1730 aa11.46□□□□□ -0.58
RARB-201ENST00000330688 SEMA3EO15041 775 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 ADAMTS3O15072 1205 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 ORC4O43929 436 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 TUBB4AP04350 444 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 HIBADHP31937 336 aaKnown RBP11.45□□□□□ -0.58
RARB-201ENST00000330688 ADKP55263 362 aaKnown RBP11.45□□□□□ -0.58
RARB-201ENST00000330688 TXNRD3Q86VQ6 643 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 TC2NQ8N9U0 490 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 JAG2Q9Y219 1238 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 NPHP1O15259 732 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 ERCC5P28715 1186 aaPredicted RBP11.45□□□□□ -0.58
RARB-201ENST00000330688 SPECC1LQ69YQ0 1117 aa11.45□□□□□ -0.58
RARB-201ENST00000330688 AEBP2Q6ZN18 517 aaPredicted RBP11.45□□□□□ -0.58
RARB-201ENST00000330688 ARHGAP6O43182 974 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 CCP110O43303 1012 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 PTGDRQ13258 359 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 NR1I3Q14994 352 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 TTC38Q5R3I4 469 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 FBXO38Q6PIJ6 1188 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 ZNF397Q8NF99 534 aaPredicted RBP11.44□□□□□ -0.58
RARB-201ENST00000330688 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 NLRP3Q96P20 1036 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 BAG1Q99933 345 aaPredicted RBP11.44□□□□□ -0.58
RARB-201ENST00000330688 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
RARB-201ENST00000330688 OGFRQ9NZT2 677 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
RARB-201ENST00000330688 VWA3AA6NCI4 1184 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 DPYDQ12882 1025 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
RARB-201ENST00000330688 ERCC6LQ2NKX8 1250 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 APTXQ7Z2E3 356 aaKnown RBP11.44□□□□□ -0.58
RARB-201ENST00000330688 FCHSD1Q86WN1 690 aa11.44□□□□□ -0.58
RARB-201ENST00000330688 CTCFLQ8NI51 663 aaPredicted RBP11.44□□□□□ -0.58
RARB-201ENST00000330688 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms