RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 CTAGE6Q86UF2 777 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 FERMT3Q86UX7 667 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 NCAPG2Q86XI2 1143 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 CTAGE4Q8IX94 777 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 DNAJC10Q8IXB1 793 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 SPDYE1Q8NFV5 336 aaPredicted RBP8.44□□□□□ -1.06
TRIM49-201ENST00000329758 COG1Q8WTW3 980 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 PIGBQ92521 554 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 SH3GL2Q99962 352 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 FSD1Q9BTV5 496 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 PUS3Q9BZE2 481 aaKnown RBP8.44□□□□□ -1.06
TRIM49-201ENST00000329758 NUP188Q5SRE5 1749 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 ERICH2A1L162 156 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 SRRM3A6NNA2 597 aaPredicted RBP8.44□□□□□ -1.06
TRIM49-201ENST00000329758 NDUFAB1O14561 156 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 TIMM10P62072 90 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 FOXO4P98177 505 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 RESTQ13127 1097 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 CAPRIN2Q6IMN6 1127 aaKnown RBP8.44□□□□□ -1.06
TRIM49-201ENST00000329758 CEP57Q86XR8 500 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 VSTM4Q8IW00 320 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 CCDC13Q8IYE1 715 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 FAM177A1Q8N128 213 aaPredicted RBP8.44□□□□□ -1.06
TRIM49-201ENST00000329758 PLBD2Q8NHP8 589 aa8.44□□□□□ -1.06
TRIM49-201ENST00000329758 CCDC47Q96A33 483 aaKnown RBP8.44□□□□□ -1.06
TRIM49-201ENST00000329758 USP42Q9H9J4 1324 aaKnown RBP8.43□□□□□ -1.06
TRIM49-201ENST00000329758 DOT1LQ8TEK3 1739 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 PFKFB2O60825 505 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 ADAMTS2O95450 1211 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 PEX19P40855 299 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 NAP1L1P55209 391 aaKnown RBP8.43□□□□□ -1.06
TRIM49-201ENST00000329758 ME3Q16798 604 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 TNNI3KQ59H18 835 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 CWF19L1Q69YN2 538 aaKnown RBP8.43□□□□□ -1.06
TRIM49-201ENST00000329758 ATL3Q6DD88 541 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 FAM173BQ6P4H8 233 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 CYB5D1Q6P9G0 228 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 DDX46Q7L014 1031 aaKnown RBP8.43□□□□□ -1.06
TRIM49-201ENST00000329758 SPATA21Q7Z572 469 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 SMARCC2Q8TAQ2 1214 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 JAKMIP1Q96N16 626 aaKnown RBP8.43□□□□□ -1.06
TRIM49-201ENST00000329758 NEUROD6Q96NK8 337 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 KDM4CQ9H3R0 1056 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 ZSWIM6Q9HCJ5 1215 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 CORO1CQ9ULV4 474 aaPredicted RBP8.43□□□□□ -1.06
TRIM49-201ENST00000329758 PCDHGA4Q9Y5G9 962 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 CYP46A1Q9Y6A2 500 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 FPGT-TNNI3KV9GXZ4 949 aa8.43□□□□□ -1.06
TRIM49-201ENST00000329758 A0A0G2JLW4 131 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 FRMD3A2A2Y4 597 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 SMNDC1O75940 238 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 FAM163BP0C2L3 166 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 TOP1P11387 765 aaKnown RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 ATP5JP18859 108 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 KCNB1Q14721 858 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 SDCCAG8Q86SQ7 713 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 NECAB1Q8N987 351 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 ENGASEQ8NFI3 743 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 FAM89AQ96GI7 184 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 GPATCH3Q96I76 525 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 IRX2Q9BZI1 471 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 SLC39A2Q9NP94 309 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 TMOD3Q9NYL9 352 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 TFIP11Q9UBB9 837 aaKnown RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 PUF60Q9UHX1 559 aaKnown RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 RBM8AQ9Y5S9 174 aaKnown RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 U3KPZ7 1027 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 COL15A1P39059 1388 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 DISP2A7MBM2 1401 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 TARSL2A2RTX5 802 aaKnown RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 PDLIM1O00151 329 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 KIF5CO60282 957 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 SKAP2O75563 359 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 RHOXF2BP0C7M4 288 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 FERP16591 822 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 GCLCP48506 637 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 ROR2Q01974 943 aaKnown RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 LAMB3Q13751 1172 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 NCAPHQ15003 741 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 ANKRD1Q15327 319 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 MIS18BP1Q6P0N0 1132 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 SLC30A9Q6PML9 568 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 APLFQ8IW19 511 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 CCDC148Q8NFR7 591 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 TRIM58Q8NG06 486 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 EVI5LQ96CN4 794 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 SLC4A9Q96Q91 983 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 RHOXF2Q9BQY4 288 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 CENPHQ9H3R5 247 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 ZSWIM4Q9H7M6 989 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 TPX2Q9ULW0 747 aaKnown RBP8.42□□□□□ -1.06
TRIM49-201ENST00000329758 TRPC6Q9Y210 931 aa8.42□□□□□ -1.06
TRIM49-201ENST00000329758 TJP1Q07157 1748 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 CCDC175P0C221 793 aa8.41□□□□□ -1.06
TRIM49-201ENST00000329758 EPB41P11171 864 aaKnown RBP8.41□□□□□ -1.06
TRIM49-201ENST00000329758 NLRP12P59046 1061 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms