RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 MYSM1Q5VVJ2 828 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 CCDC186Q7Z3E2 898 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 TAX1BP1Q86VP1 789 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 SNX29Q8TEQ0 813 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 C16orf45Q96MC5 204 aaPredicted RBP12.78□□□□□ -0.36
COL4A5-201ENST00000328300 STMN4Q9H169 189 aaPredicted RBP12.78□□□□□ -0.36
COL4A5-201ENST00000328300 CUEDC2Q9H467 287 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 PIK3C2BO00750 1634 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 KIDINS220Q9ULH0 1771 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 RNF26Q9BY78 433 aaPredicted RBP12.78□□□□□ -0.36
COL4A5-201ENST00000328300 FAM107BQ9H098 131 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 CYP27B1O15528 508 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 MRVI1Q9Y6F6 885 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 CTAGE9A4FU28 777 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 SCG2P13521 617 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 ABCD1P33897 745 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 PNMA1Q8ND90 353 aa12.78□□□□□ -0.36
COL4A5-201ENST00000328300 AKR1B15C9JRZ8 316 aaPredicted RBP12.78□□□□□ -0.36
COL4A5-201ENST00000328300 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.36
COL4A5-201ENST00000328300 MICALCLQ6ZW33 695 aa12.77□□□□□ -0.36
COL4A5-201ENST00000328300 FNBP1Q96RU3 617 aa12.77□□□□□ -0.36
COL4A5-201ENST00000328300 SMCO2A6NFE2 343 aa12.77□□□□□ -0.36
COL4A5-201ENST00000328300 DYNC1I1O14576 645 aa12.77□□□□□ -0.36
COL4A5-201ENST00000328300 CPA1P15085 419 aa12.77□□□□□ -0.36
COL4A5-201ENST00000328300 CABP7Q86V35 215 aa12.77□□□□□ -0.36
COL4A5-201ENST00000328300 MASTLQ96GX5 879 aa12.77□□□□□ -0.36
COL4A5-201ENST00000328300 TRMT1Q9NXH9 659 aaKnown RBP12.77□□□□□ -0.36
COL4A5-201ENST00000328300 SYNRGQ9UMZ2 1314 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 PXDNLA1KZ92 1463 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 ATP2A1O14983 1001 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 FGAP02671 866 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 ERFEQ4G0M1 354 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 NAP1L3Q99457 506 aaPredicted RBP12.77□□□□□ -0.37
COL4A5-201ENST00000328300 CCDC77Q9BR77 488 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 TRAF5O00463 557 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 NOP56O00567 594 aaKnown RBP12.77□□□□□ -0.37
COL4A5-201ENST00000328300 PHKA1P46020 1223 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 ICA1Q05084 483 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.37
COL4A5-201ENST00000328300 TRIM28Q13263 835 aaKnown RBP12.77□□□□□ -0.37
COL4A5-201ENST00000328300 WDR19Q8NEZ3 1342 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 CARMIL3Q8ND23 1372 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 POLR2MP0CAP2 368 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.37
COL4A5-201ENST00000328300 VTI1AQ96AJ9 217 aa12.77□□□□□ -0.37
COL4A5-201ENST00000328300 NOC4LQ9BVI4 516 aaKnown RBP12.77□□□□□ -0.37
COL4A5-201ENST00000328300 NDC80O14777 642 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 RCAN1P53805 252 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 DYDC1Q8WWB3 177 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 DCPSQ96C86 337 aaKnown RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 NCOA5Q9HCD5 579 aaKnown RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 CALCOCO1Q9P1Z2 691 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 TXKP42681 527 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 YWHAEP62258 255 aaKnown RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 COL15A1P39059 1388 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 BMS1Q14692 1282 aaKnown RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 CCDC51Q96ER9 411 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 ZNF202O95125 648 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 GCFC2P16383 781 aaKnown RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 SLC8A3P57103 927 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 POSTNQ15063 836 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 ME3Q16798 604 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 LRRC7Q96NW7 1537 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 FSD2A1L4K1 749 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 LONP1P36776 959 aaKnown RBP12.76□□□□□ -0.37
COL4A5-201ENST00000328300 SUPT20HL1Q3ZLR7 823 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 CCDC155Q8N6L0 562 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 ADAMTS13Q76LX8 1427 aa12.76□□□□□ -0.37
COL4A5-201ENST00000328300 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
COL4A5-201ENST00000328300 HLTFQ14527 1009 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL4A5-201ENST00000328300 KANSL2Q9H9L4 492 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 BCS1LQ9Y276 419 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 HACE1Q8IYU2 909 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 SREK1Q8WXA9 508 aaKnown RBP12.75□□□□□ -0.37
COL4A5-201ENST00000328300 TSNARE1Q96NA8 513 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 BRIP1Q9BX63 1249 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 FOXP1Q9H334 677 aaPredicted RBP12.75□□□□□ -0.37
COL4A5-201ENST00000328300 CEP170BQ9Y4F5 1589 aaPredicted RBP12.75□□□□□ -0.37
COL4A5-201ENST00000328300 PTH1RQ03431 593 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 NCAPH2Q6IBW4 605 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 FBXO11Q86XK2 927 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 IFNKQ9P0W0 207 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 TRIM37O94972 964 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 EXOC8Q8IYI6 725 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 TTLL11Q8NHH1 800 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL4A5-201ENST00000328300 PREX1Q8TCU6 1659 aa12.75□□□□□ -0.37
COL4A5-201ENST00000328300 PRPF4BQ13523 1007 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms