RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 SRBD1Q8N5C6 995 aaKnown RBP21.53■■□□□ 1.04
SPSB1-201ENST00000328089 WDR19Q8NEZ3 1342 aa21.52■■□□□ 1.04
SPSB1-201ENST00000328089 UBXN4Q92575 508 aa21.52■■□□□ 1.04
SPSB1-201ENST00000328089 TIGD1Q96MW7 591 aa21.52■■□□□ 1.04
SPSB1-201ENST00000328089 CTNND2Q9UQB3 1225 aa21.52■■□□□ 1.04
SPSB1-201ENST00000328089 ETF1P62495 437 aaKnown RBP21.52■■□□□ 1.04
SPSB1-201ENST00000328089 LINC00116Q8NCU8 138 aa21.52■■□□□ 1.04
SPSB1-201ENST00000328089 PPP2R2CQ9Y2T4 447 aa21.52■■□□□ 1.04
SPSB1-201ENST00000328089 USP17L3A6NCW0 530 aa21.51■■□□□ 1.03
SPSB1-201ENST00000328089 USP17L4A6NCW7 530 aa21.51■■□□□ 1.03
SPSB1-201ENST00000328089 GNPATO15228 680 aa21.51■■□□□ 1.03
SPSB1-201ENST00000328089 USP17L1Q7RTZ2 530 aa21.51■■□□□ 1.03
SPSB1-201ENST00000328089 DZIP1Q86YF9 867 aaKnown RBP21.51■■□□□ 1.03
SPSB1-201ENST00000328089 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
SPSB1-201ENST00000328089 RIOK1Q9BRS2 568 aaKnown RBP21.51■■□□□ 1.03
SPSB1-201ENST00000328089 FOXP1Q9H334 677 aaPredicted RBP21.51■■□□□ 1.03
SPSB1-201ENST00000328089 BPIFA3Q9BQP9 254 aa21.51■■□□□ 1.03
SPSB1-201ENST00000328089 MDM2Q00987 491 aaPredicted RBP21.51■■□□□ 1.03
SPSB1-201ENST00000328089 PARP10Q53GL7 1025 aa21.51■■□□□ 1.03
SPSB1-201ENST00000328089 POLR3GO15318 223 aaPredicted RBP21.5■■□□□ 1.03
SPSB1-201ENST00000328089 NUP188Q5SRE5 1749 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 RRAGBQ5VZM2 374 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 STAG2Q8N3U4 1231 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 ERO1AQ96HE7 468 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 ZNF652Q9Y2D9 606 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.5■■□□□ 1.03
SPSB1-201ENST00000328089 SRPRBQ9Y5M8 271 aaKnown RBP21.5■■□□□ 1.03
SPSB1-201ENST00000328089 ACTN4O43707 911 aaKnown RBP21.5■■□□□ 1.03
SPSB1-201ENST00000328089 USP5P45974 858 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 SEC23AQ15436 765 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 TTC38Q5R3I4 469 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 TMTC2Q8N394 836 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 AKAP11Q9UKA4 1901 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 LMTK3Q96Q04 1460 aa21.5■■□□□ 1.03
SPSB1-201ENST00000328089 SLIT2O94813 1529 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 SPECC1LQ69YQ0 1117 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 SMAP1Q8IYB5 467 aaPredicted RBP21.49■■□□□ 1.03
SPSB1-201ENST00000328089 RNF216Q9NWF9 866 aaPredicted RBP21.49■■□□□ 1.03
SPSB1-201ENST00000328089 PUF60Q9UHX1 559 aaKnown RBP21.49■■□□□ 1.03
SPSB1-201ENST00000328089 KDM4FA0A1W2PPD8 638 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 RPS8P62241 208 aaKnown RBP21.49■■□□□ 1.03
SPSB1-201ENST00000328089 KLHL34Q8N239 644 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 PAGE5Q96GU1 130 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 RAD21O60216 631 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 TFAP4Q01664 338 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 IGSF22Q8N9C0 903 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 BRMS1Q9HCU9 246 aa21.49■■□□□ 1.03
SPSB1-201ENST00000328089 HIBADHP31937 336 aaKnown RBP21.48■■□□□ 1.03
SPSB1-201ENST00000328089 AMIGO3Q86WK7 504 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 CCDC12Q8WUD4 166 aaPredicted RBP21.48■■□□□ 1.03
SPSB1-201ENST00000328089 SETDB2Q96T68 719 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 MKNK2Q9HBH9 465 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 CEP131Q9UPN4 1083 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 RBL2Q08999 1139 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 TROAPQ12815 778 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 DPYDQ12882 1025 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 HEATR3Q7Z4Q2 680 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 ZNF397Q8NF99 534 aaPredicted RBP21.48■■□□□ 1.03
SPSB1-201ENST00000328089 CCDC34Q96HJ3 373 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 TAB2Q9NYJ8 693 aa21.48■■□□□ 1.03
SPSB1-201ENST00000328089 CUL4BQ13620 913 aa21.47■■□□□ 1.03
SPSB1-201ENST00000328089 GRIK5Q16478 980 aa21.47■■□□□ 1.03
SPSB1-201ENST00000328089 PPFIBP1Q86W92 1011 aa21.47■■□□□ 1.03
SPSB1-201ENST00000328089 NLRP3Q96P20 1036 aa21.47■■□□□ 1.03
SPSB1-201ENST00000328089 DCP1AQ9NPI6 582 aaPredicted RBP21.47■■□□□ 1.03
SPSB1-201ENST00000328089 TOGARAM1Q9Y4F4 1720 aa21.47■■□□□ 1.03
SPSB1-201ENST00000328089 GDAQ9Y2T3 454 aa21.47■■□□□ 1.03
SPSB1-201ENST00000328089 PNPLA7Q6ZV29 1317 aa21.47■■□□□ 1.03
SPSB1-201ENST00000328089 TICAM2Q86XR7 235 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 MAPKAPK5Q8IW41 473 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 TC2NQ8N9U0 490 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 PRDM4Q9UKN5 801 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 TFR2Q9UP52 801 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 ABL1P00519 1130 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 CASQ1P31415 396 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 REXO1L1PQ8IX06 675 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 ZNF446Q9NWS9 450 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 OGFRQ9NZT2 677 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 N4BP3O15049 544 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 ZPR1O75312 459 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 CASP14P31944 242 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 EIF6P56537 245 aaKnown RBP21.46■■□□□ 1.03
SPSB1-201ENST00000328089 MLKLQ8NB16 471 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 TGFBRAP1Q8WUH2 860 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 NSUN4Q96CB9 384 aaKnown RBP21.46■■□□□ 1.03
SPSB1-201ENST00000328089 HINFPQ9BQA5 517 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 RNF26Q9BY78 433 aaPredicted RBP21.46■■□□□ 1.03
SPSB1-201ENST00000328089 MRPL44Q9H9J2 332 aaKnown RBP21.46■■□□□ 1.03
SPSB1-201ENST00000328089 SYNRGQ9UMZ2 1314 aa21.46■■□□□ 1.03
SPSB1-201ENST00000328089 TRIM49BA6NDI0 452 aa21.45■■□□□ 1.02
SPSB1-201ENST00000328089 MORC3Q14149 939 aa21.45■■□□□ 1.02
SPSB1-201ENST00000328089 PARP4Q9UKK3 1724 aaKnown RBP21.45■■□□□ 1.02
SPSB1-201ENST00000328089 CLCN6P51797 869 aa21.45■■□□□ 1.02
SPSB1-201ENST00000328089 TRIM65Q6PJ69 517 aa21.45■■□□□ 1.02
SPSB1-201ENST00000328089 ABCC6O95255 1503 aa21.45■■□□□ 1.02
SPSB1-201ENST00000328089 PSDA5PKW4 1024 aaPredicted RBP21.44■■□□□ 1.02
SPSB1-201ENST00000328089 NGLY1Q96IV0 654 aa21.44■■□□□ 1.02
SPSB1-201ENST00000328089 DDX41Q9UJV9 622 aaKnown RBP21.44■■□□□ 1.02
SPSB1-201ENST00000328089 STK36Q9NRP7 1315 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms