RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPAIN-201ENST00000327154 KIAA1683Q9H0B3 1180 aa17.07■□□□□ 0.32
RPAIN-201ENST00000327154 FOCADQ5VW36 1801 aa17.07■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L15C9J2P7 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L13C9JLJ4 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L11C9JVI0 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L18D6R9N7 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L22D6RA61 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L17D6RBQ6 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L19D6RCP7 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L20D6RJB6 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-201ENST00000327154 MBD4O95243 580 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 CHGBP05060 677 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 CYP2B6P20813 491 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 ERVK-9P63128 1117 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 ERVK-24P63145 666 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 TRIM32Q13049 653 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 SEPT2Q15019 361 aa17.06■□□□□ 0.32
RPAIN-201ENST00000327154 CCAR1Q8IX12 1150 aaKnown RBP17.06■□□□□ 0.32
RPAIN-201ENST00000327154 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-201ENST00000327154 MPHOSPH10O00566 681 aaKnown RBP17.05■□□□□ 0.32
RPAIN-201ENST00000327154 HMGCRP04035 888 aa17.05■□□□□ 0.32
RPAIN-201ENST00000327154 MAPK4P31152 587 aa17.05■□□□□ 0.32
RPAIN-201ENST00000327154 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
RPAIN-201ENST00000327154 SLC44A5Q8NCS7 719 aa17.05■□□□□ 0.32
RPAIN-201ENST00000327154 GTF3C2Q8WUA4 911 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-201ENST00000327154 NUDT12Q9BQG2 462 aa17.05■□□□□ 0.32
RPAIN-201ENST00000327154 HTATIP2Q9BUP3 242 aa17.05■□□□□ 0.32
RPAIN-201ENST00000327154 PORCNQ9H237 461 aa17.05■□□□□ 0.32
RPAIN-201ENST00000327154 VCAM1P19320 739 aa17.04■□□□□ 0.32
RPAIN-201ENST00000327154 DYNLL2Q96FJ2 89 aa17.04■□□□□ 0.32
RPAIN-201ENST00000327154 CRISPLD2Q9H0B8 497 aa17.04■□□□□ 0.32
RPAIN-201ENST00000327154 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPAIN-201ENST00000327154 ATP8A2Q9NTI2 1148 aa17.04■□□□□ 0.32
RPAIN-201ENST00000327154 COLQQ9Y215 455 aaPredicted RBP17.04■□□□□ 0.32
RPAIN-201ENST00000327154 RABGAP1Q9Y3P9 1069 aa17.04■□□□□ 0.32
RPAIN-201ENST00000327154 MYH1P12882 1939 aa17.04■□□□□ 0.32
RPAIN-201ENST00000327154 XRCC5P13010 732 aaKnown RBP17.03■□□□□ 0.32
RPAIN-201ENST00000327154 CAPN2P17655 700 aa17.03■□□□□ 0.32
RPAIN-201ENST00000327154 UBE3CQ15386 1083 aa17.03■□□□□ 0.32
RPAIN-201ENST00000327154 GPR142Q7Z601 462 aa17.03■□□□□ 0.32
RPAIN-201ENST00000327154 TRIB2Q92519 343 aa17.03■□□□□ 0.32
RPAIN-201ENST00000327154 RPAP3Q9H6T3 665 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-201ENST00000327154 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
RPAIN-201ENST00000327154 HMX1Q9NP08 348 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-201ENST00000327154 DOCK3Q8IZD9 2030 aa17.03■□□□□ 0.32
RPAIN-201ENST00000327154 RPTORQ8N122 1335 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 CYP2D7A0A087X1C5 515 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 A0A1W2PRG0 241 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L12C9JPN9 530 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 USP17L21D6R901 530 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 SMIM22K7EJ46 135 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 CNMDO75829 334 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 PLEKHH3Q7Z736 793 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 SOCS4Q8WXH5 440 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
RPAIN-201ENST00000327154 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 SWAP70Q9UH65 585 aa17.02■□□□□ 0.32
RPAIN-201ENST00000327154 MORN1Q5T089 497 aa17.01■□□□□ 0.31
RPAIN-201ENST00000327154 C12orf60Q5U649 245 aa17.01■□□□□ 0.31
RPAIN-201ENST00000327154 ZSCAN25Q6NSZ9 544 aa17.01■□□□□ 0.31
RPAIN-201ENST00000327154 TMEM179Q6ZVK1 233 aa17.01■□□□□ 0.31
RPAIN-201ENST00000327154 USP6NLQ92738 828 aa17.01■□□□□ 0.31
RPAIN-201ENST00000327154 PAWRQ96IZ0 340 aaKnown RBP17.01■□□□□ 0.31
RPAIN-201ENST00000327154 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
RPAIN-201ENST00000327154 SLC4A4Q9Y6R1 1079 aa17.01■□□□□ 0.31
RPAIN-201ENST00000327154 AKR1B1P15121 316 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 RGS2P41220 211 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 CDK8P49336 464 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 CCNA1P78396 465 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 WDR78Q5VTH9 848 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 SIAH1Q8IUQ4 282 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 DDRGK1Q96HY6 314 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 BTBD7Q9P203 1132 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 NR2E3Q9Y5X4 410 aa17■□□□□ 0.31
RPAIN-201ENST00000327154 SPDYE16A6NNV3 312 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-201ENST00000327154 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
RPAIN-201ENST00000327154 PRKAR2AP13861 404 aaKnown RBP16.99■□□□□ 0.31
RPAIN-201ENST00000327154 ZKSCAN1P17029 563 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-201ENST00000327154 COG2Q14746 738 aa16.99■□□□□ 0.31
RPAIN-201ENST00000327154 CCL14Q16627 93 aa16.99■□□□□ 0.31
RPAIN-201ENST00000327154 KIAA1755Q5JYT7 1200 aa16.99■□□□□ 0.31
RPAIN-201ENST00000327154 MAP3K21Q5TCX8 1036 aa16.99■□□□□ 0.31
RPAIN-201ENST00000327154 TSHZ3Q63HK5 1081 aa16.99■□□□□ 0.31
RPAIN-201ENST00000327154 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
RPAIN-201ENST00000327154 AMOTL1Q8IY63 956 aa16.99■□□□□ 0.31
RPAIN-201ENST00000327154 TRMT44Q8IYL2 757 aaKnown RBP16.99■□□□□ 0.31
RPAIN-201ENST00000327154 DIS3LQ8TF46 1054 aaKnown RBP16.99■□□□□ 0.31
RPAIN-201ENST00000327154 HOXC10Q9NYD6 342 aa16.99■□□□□ 0.31
RPAIN-201ENST00000327154 EVI5O60447 810 aa16.98■□□□□ 0.31
RPAIN-201ENST00000327154 CACNB2Q08289 660 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-201ENST00000327154 MAP2K5Q13163 448 aa16.98■□□□□ 0.31
RPAIN-201ENST00000327154 CTR9Q6PD62 1173 aa16.98■□□□□ 0.31
RPAIN-201ENST00000327154 CHRDL2Q6WN34 429 aa16.98■□□□□ 0.31
RPAIN-201ENST00000327154 NECAB2Q7Z6G3 386 aa16.98■□□□□ 0.31
RPAIN-201ENST00000327154 CLEC10AQ8IUN9 316 aa16.98■□□□□ 0.31
RPAIN-201ENST00000327154 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
RPAIN-201ENST00000327154 CCDC17Q96LX7 622 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms