RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DDAH1O94760 285 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 GDF11O95390 407 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 SCRN1Q12765 414 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 RRP1BQ14684 758 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 EAPPQ56P03 285 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 DCAF15Q66K64 600 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 CATIPQ7Z7H3 387 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 MTMR4Q9NYA4 1195 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 MYH4Q9Y623 1939 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 METAP2P50579 478 aaKnown RBP eCLIP11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 MIGA2Q7L4E1 593 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 MICU3Q86XE3 530 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 KAT14Q9H8E8 782 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 DOCK1Q14185 1865 aa11.99□□□□□ -0.49
VIPAS39-201ENST00000327028 GOLGA8AA7E2F4 631 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 KRT26Q7Z3Y9 468 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 ZNF341Q9BYN7 854 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 CABP5Q9NP86 173 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 STX8Q9UNK0 236 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 PHF20L1A8MW92 1017 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 ADM5C9JUS6 153 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 CALM1P0DP23 149 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 CALM2P0DP24 149 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 CALM3P0DP25 149 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 VEGFAP15692 232 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 CCT2P78371 535 aaKnown RBP11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 SHROOM1Q2M3G4 852 aaPredicted RBP11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 MYL10Q9BUA6 226 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 ZBTB21Q9ULJ3 1066 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 PAPPA2Q9BXP8 1791 aa11.98□□□□□ -0.49
VIPAS39-201ENST00000327028 TTLL1O95922 423 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 GH2P01242 217 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 CAP2P40123 477 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 JAG1P78504 1218 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 RAB11FIP4Q86YS3 637 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 PNMA1Q8ND90 353 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 LLPHQ9BRT6 129 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 KANSL2Q9H9L4 492 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 RRAGCQ9HB90 399 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 NCOA5Q9HCD5 579 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 GINM1Q9NU53 330 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 DHX16O60231 1041 aaKnown RBP11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 TROAPQ12815 778 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 SEPT2Q15019 361 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 PPP2R5BQ15173 497 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 RTN1Q16799 776 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 PRAMEF18Q5VWM3 479 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 CLEC10AQ8IUN9 316 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 NYAP2Q9P242 653 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 ZNF112Q9UJU3 913 aa11.97□□□□□ -0.49
VIPAS39-201ENST00000327028 RXRAP19793 462 aa11.96□□□□□ -0.49
VIPAS39-201ENST00000327028 ICA1Q05084 483 aa11.96□□□□□ -0.49
VIPAS39-201ENST00000327028 NUP133Q8WUM0 1156 aa11.96□□□□□ -0.49
VIPAS39-201ENST00000327028 MAP3K14Q99558 947 aa11.96□□□□□ -0.49
VIPAS39-201ENST00000327028 CWC22Q9HCG8 908 aaKnown RBP11.96□□□□□ -0.49
VIPAS39-201ENST00000327028 CTNND1O60716 968 aaKnown RBP11.96□□□□□ -0.5
VIPAS39-201ENST00000327028 DDIT3P35638 169 aa11.96□□□□□ -0.5
VIPAS39-201ENST00000327028 USP48Q86UV5 1035 aa11.96□□□□□ -0.5
VIPAS39-201ENST00000327028 CDCA5Q96FF9 252 aa11.96□□□□□ -0.5
VIPAS39-201ENST00000327028 RBM28Q9NW13 759 aaKnown RBP11.96□□□□□ -0.5
VIPAS39-201ENST00000327028 SMC3Q9UQE7 1217 aa11.96□□□□□ -0.5
VIPAS39-201ENST00000327028 OTOFQ9HC10 1997 aa11.96□□□□□ -0.5
VIPAS39-201ENST00000327028 CCDC196A0A1B0GTZ2 297 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 ASNSP08243 561 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 CDC27P30260 824 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 CDC37L1Q7L3B6 337 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 FANCBQ8NB91 859 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 SMARCC2Q8TAQ2 1214 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 FAM217BQ9NTX9 383 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 CLIP2Q9UDT6 1046 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 SYNPO2Q9UMS6 1093 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 CPLX1O14810 134 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 CTDNEP1O95476 244 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 EEF2P13639 858 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 GRM4Q14833 912 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 RAB3GAP1Q15042 981 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 LDHDQ86WU2 507 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 LRRC47Q8N1G4 583 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 CTCFLQ8NI51 663 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 MKL1Q969V6 931 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 GLIS2Q9BZE0 524 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
VIPAS39-201ENST00000327028 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
VIPAS39-201ENST00000327028 CDKL5O76039 1030 aa11.94□□□□□ -0.5
VIPAS39-201ENST00000327028 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
VIPAS39-201ENST00000327028 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
VIPAS39-201ENST00000327028 KIF5BP33176 963 aa11.94□□□□□ -0.5
VIPAS39-201ENST00000327028 CPLX2Q6PUV4 134 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-201ENST00000327028 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
VIPAS39-201ENST00000327028 NMRK2Q9NPI5 230 aa11.94□□□□□ -0.5
VIPAS39-201ENST00000327028 JAK2O60674 1132 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms