RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 USP17L12C9JPN9 530 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 USP17L21D6R901 530 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 GOLGA6L19H0YKK7 550 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 DLGAP5Q15398 846 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 APPBP2Q92624 585 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 IL17RAQ96F46 866 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 CCDC34Q96HJ3 373 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 L2HGDHQ9H9P8 463 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
ABCF1-201ENST00000326195 SLC27A2O14975 620 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 SART3Q15020 963 aaKnown RBP11.85□□□□□ -0.51
ABCF1-201ENST00000326195 ME3Q16798 604 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 C11orf57Q6ZUT1 292 aaPredicted RBP11.85□□□□□ -0.51
ABCF1-201ENST00000326195 FANCGO15287 622 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 RANBP6O60518 1105 aaKnown RBP11.85□□□□□ -0.51
ABCF1-201ENST00000326195 LMNB1P20700 586 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 OAS2P29728 719 aaKnown RBP11.85□□□□□ -0.51
ABCF1-201ENST00000326195 CRKP46108 304 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
ABCF1-201ENST00000326195 CC2D2BQ6DHV5 1058 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 FOXR1Q6PIV2 292 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 CDC37L1Q7L3B6 337 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 PACS2Q86VP3 889 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 CDAN1Q8IWY9 1227 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 TXLNBQ8N3L3 684 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 TEKT1Q969V4 418 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 UBXN6Q9BZV1 441 aa11.85□□□□□ -0.51
ABCF1-201ENST00000326195 BECN2A8MW95 431 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 FGAP02671 866 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 HSPD1P10809 573 aaKnown RBP11.84□□□□□ -0.51
ABCF1-201ENST00000326195 SRLQ86TD4 932 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 ZFPM1Q8IX07 1006 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 SCAND2PQ9GZW5 306 aaPredicted RBP11.84□□□□□ -0.51
ABCF1-201ENST00000326195 ANKRD65E5RJM6 399 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 MPHOSPH10O00566 681 aaKnown RBP11.84□□□□□ -0.51
ABCF1-201ENST00000326195 IQCB1Q15051 598 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 SPTY2D1Q68D10 685 aaPredicted RBP11.84□□□□□ -0.51
ABCF1-201ENST00000326195 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 COL1A1P02452 1464 aaPredicted RBP11.84□□□□□ -0.51
ABCF1-201ENST00000326195 RXRAP19793 462 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 LRRFIP1Q32MZ4 808 aaKnown RBP11.84□□□□□ -0.51
ABCF1-201ENST00000326195 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 DACT2Q5SW24 774 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 DRC1Q96MC2 740 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 GPHNQ9NQX3 736 aaPredicted RBP11.84□□□□□ -0.51
ABCF1-201ENST00000326195 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
ABCF1-201ENST00000326195 DAGLAQ9Y4D2 1042 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
ABCF1-201ENST00000326195 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.521e-6■■□□□ 12.8
ABCF1-201ENST00000326195 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
ABCF1-201ENST00000326195 FAM47AQ5JRC9 791 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 CCDC84Q86UT8 332 aaPredicted RBP11.83□□□□□ -0.52
ABCF1-201ENST00000326195 ORC3Q9UBD5 711 aaPredicted RBP11.83□□□□□ -0.52
ABCF1-201ENST00000326195 DDX60Q8IY21 1712 aaKnown RBP11.83□□□□□ -0.52
ABCF1-201ENST00000326195 TBC1D8O95759 1140 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 TEX35Q5T0J7 233 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 CCDC73Q6ZRK6 1079 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.83□□□□□ -0.523e-9■■■■■ 44.4
ABCF1-201ENST00000326195 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
ABCF1-201ENST00000326195 BAG3O95817 575 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 SNW1Q13573 536 aaKnown RBP11.83□□□□□ -0.52
ABCF1-201ENST00000326195 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 BRF1Q92994 677 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 PGBD1Q96JS3 809 aa11.83□□□□□ -0.52
ABCF1-201ENST00000326195 MED23Q9ULK4 1368 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 ZNF213O14771 459 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 CPLX1O14810 134 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 IL1R1P14778 569 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-201ENST00000326195 TMCO3Q6UWJ1 677 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 RBM43Q6ZSC3 357 aaKnown RBP11.82□□□□□ -0.52
ABCF1-201ENST00000326195 CLEC10AQ8IUN9 316 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 ERCC4Q92889 916 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-201ENST00000326195 TPCN1Q9ULQ1 816 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 TTLL12Q14166 644 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-201ENST00000326195 CRACR2BQ8N4Y2 399 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-201ENST00000326195 PPP1R13BQ96KQ4 1090 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 STRBPQ96SI9 672 aaKnown RBP11.82□□□□□ -0.52
ABCF1-201ENST00000326195 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-201ENST00000326195 MYH3P11055 1940 aa11.82□□□□□ -0.52
ABCF1-201ENST00000326195 B4E1Z4 1266 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 H7C1D1 291 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 LDHCP07864 332 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 POTEIP0CG38 1075 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 RPS6KB1P23443 525 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 CDC25BP30305 580 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 CCT2P78371 535 aaKnown RBP11.81□□□□□ -0.52
ABCF1-201ENST00000326195 SMC1AQ14683 1233 aaKnown RBP11.81□□□□□ -0.52
ABCF1-201ENST00000326195 STRIP1Q5VSL9 837 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 MAP4K1Q92918 833 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 CRNKL1Q9BZJ0 848 aaKnown RBP11.81□□□□□ -0.52
ABCF1-201ENST00000326195 CLSTN2Q9H4D0 955 aa11.81□□□□□ -0.52
ABCF1-201ENST00000326195 KCNG1Q9UIX4 513 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 1023.2 ms