RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	HDAC9	Q9UKV0	1011 aa		13.37	□□□□□ -0.27
DDR1-223	ENST00000324771	COL15A1	P39059	1388 aa		13.37	□□□□□ -0.27
DDR1-223	ENST00000324771	TCP10L2	B9ZVM9	353 aa		13.37	□□□□□ -0.27
DDR1-223	ENST00000324771	UBE2Q2L	H0YL09	131 aa		13.37	□□□□□ -0.27
DDR1-223	ENST00000324771	C2CD5	Q86YS7	1000 aa		13.37	□□□□□ -0.27
DDR1-223	ENST00000324771	BSDC1	Q9NW68	430 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-223	ENST00000324771	GUCA1B	Q9UMX6	200 aa		13.37	□□□□□ -0.27
DDR1-223	ENST00000324771	RICTOR	Q6R327	1708 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	WTIP	A6NIX2	430 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	GSG1L2	A8MUP6	293 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	SCG2	P13521	617 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	ARID5B	Q14865	1188 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	HS1BP3	Q53T59	392 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	KRT27	Q7Z3Y8	459 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	CSRNP2	Q9H175	543 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	STK32B	Q9NY57	414 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	AFF2	P51816	1311 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	VGLL3	A8MV65	326 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	MMP10	P09238	476 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	TEC	P42680	631 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	SLC39A14	Q15043	492 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	TMCO3	Q6UWJ1	677 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	JADE2	Q9NQC1	790 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	RMND1	Q9NWS8	449 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	RTEL1	Q9NZ71	1219 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	DDX39A	O00148	427 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	CFB	P00751	764 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	CMA1	P23946	247 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	SSR1	P43307	286 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	NOP2	P46087	812 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	IGSF22	Q8N9C0	903 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	OXER1	Q8TDS5	423 aa		13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	FAM84B	Q96KN1	310 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	CGN	Q9P2M7	1197 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	PUF60	Q9UHX1	559 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-223	ENST00000324771	XDH	P47989	1333 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	RIMS1	Q86UR5	1692 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	CPD	O75976	1380 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	NONO	Q15233	471 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	RIOK3	O14730	519 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	TBCA	O75347	108 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	NFIX	Q14938	502 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	BLID	Q8IZY5	108 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	TEKT1	Q969V4	418 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	EPSTI1	Q96J88	318 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	LRWD1	Q9UFC0	647 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	NARF	Q9UHQ1	456 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	KDM6A	O15550	1401 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	KIF2A	O00139	706 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	MYCN	P04198	464 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	GUCY1A2	P33402	732 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	MRPL12	P52815	198 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	WWC2	Q6AWC2	1192 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	NELFCD	Q8IXH7	590 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	UBN2	Q6ZU65	1347 aa		13.35	□□□□□ -0.27
DDR1-223	ENST00000324771	TNIP1	Q15025	636 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	CCDC174	Q6PII3	467 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	REXO1	Q8N1G1	1221 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	LINC00116	Q8NCU8	138 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	SNX29	Q8TEQ0	813 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	SYMPK	Q92797	1274 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	DESI2	Q9BSY9	194 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	TRAF5	O00463	557 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	ATP2B4	P23634	1241 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	KLRK1	P26718	216 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	KCTD1	Q719H9	257 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	COA7	Q96BR5	231 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	ZFP91	Q96JP5	570 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	SPAG5	Q96R06	1193 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	BAG1	Q99933	345 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	SALL3	Q9BXA9	1300 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	RAD17	O75943	681 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	GDF11	O95390	407 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	ATP1A3	P13637	1013 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	KRBA2	Q6ZNG9	492 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	AK9	Q5TCS8	1911 aa		13.34	□□□□□ -0.27
DDR1-223	ENST00000324771	CAMTA2	O94983	1202 aa		13.33	□□□□□ -0.27
DDR1-223	ENST00000324771	IFNAR1	P17181	557 aa		13.33	□□□□□ -0.27
DDR1-223	ENST00000324771	TBC1D8B	Q0IIM8	1120 aa		13.33	□□□□□ -0.27
DDR1-223	ENST00000324771	CAPZA3	Q96KX2	299 aa		13.33	□□□□□ -0.27
DDR1-223	ENST00000324771	LUC7L	Q9NQ29	371 aa	Known RBP	13.33	□□□□□ -0.27
DDR1-223	ENST00000324771	ATP8A2	Q9NTI2	1148 aa		13.33	□□□□□ -0.27
DDR1-223	ENST00000324771	PPP1R12B	O60237	982 aa	Predicted RBP	13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	CLEC4G	Q6UXB4	293 aa		13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	PRIMPOL	Q96LW4	560 aa		13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	GOLPH3L	Q9H4A5	285 aa		13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.33	□□□□□ -0.28	8e-8	■■■■□ 25.6
DDR1-223	ENST00000324771	SNAP25	P60880	206 aa		13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	ZNF569	Q5MCW4	686 aa		13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	ZNF34	Q8IZ26	560 aa		13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	CSGALNACT2	Q8N6G5	542 aa		13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	TBC1D22A	Q8WUA7	517 aa		13.33	□□□□□ -0.28
DDR1-223	ENST00000324771	TMCO5B	A8MYB1	307 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	CSF1R	P07333	972 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	KIF28P	B7ZC32	967 aa		13.32	□□□□□ -0.28
DDR1-223	ENST00000324771	PRPF4B	Q13523	1007 aa	Known RBP	13.32	□□□□□ -0.28

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