RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TBC1D12O60347 775 aa14.87□□□□□ -0.03
DDX39A-202ENST00000324340 DDNO94850 711 aaPredicted RBP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 TNNI2P48788 182 aa14.87□□□□□ -0.03
DDX39A-202ENST00000324340 METAP2P50579 478 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 CCT2P78371 535 aaKnown RBP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 MAP3K10Q02779 954 aa14.87□□□□□ -0.03
DDX39A-202ENST00000324340 PPP2R5BQ15173 497 aa14.87□□□□□ -0.03
DDX39A-202ENST00000324340 TBC1D10BQ4KMP7 808 aaPredicted RBP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 SYNE3Q6ZMZ3 975 aa14.87□□□□□ -0.03
DDX39A-202ENST00000324340 ZSCAN29Q8IWY8 852 aaPredicted RBP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 CRACR2BQ8N4Y2 399 aaPredicted RBP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 NSUN7Q8NE18 718 aaKnown RBP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 L3MBTL3Q96JM7 780 aaPredicted RBP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 CSRNP1Q96S65 589 aa14.87□□□□□ -0.03
DDX39A-202ENST00000324340 VEZTQ9HBM0 779 aa14.87□□□□□ -0.03
DDX39A-202ENST00000324340 GOLGB1Q14789 3259 aaKnown RBP14.87□□□□□ -0.03
DDX39A-202ENST00000324340 DDAH1O94760 285 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 CALM1P0DP23 149 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 CALM2P0DP24 149 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 CALM3P0DP25 149 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 PDIA4P13667 645 aaKnown RBP14.86□□□□□ -0.03
DDX39A-202ENST00000324340 GJB2P29033 226 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 EPS15P42566 896 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 NUCB2P80303 420 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 TROAPQ12815 778 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 RAB3GAP1Q15042 981 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 CSPP1Q1MSJ5 1256 aa14.86□□□□□ -0.03
DDX39A-202ENST00000324340 RBM26Q5T8P6 1007 aaKnown RBP14.86□□□□□ -0.03
DDX39A-202ENST00000324340 UTP14CQ5TAP6 766 aaKnown RBP14.86□□□□□ -0.03
DDX39A-202ENST00000324340 NCOA5Q9HCD5 579 aaKnown RBP14.86□□□□□ -0.03
DDX39A-202ENST00000324340 FAM217BQ9NTX9 383 aaPredicted RBP14.86□□□□□ -0.03
DDX39A-202ENST00000324340 NAP1L2Q9ULW6 460 aaPredicted RBP14.86□□□□□ -0.03
DDX39A-202ENST00000324340 GOLGA8AA7E2F4 631 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 AKR1B1P15121 316 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 HMGN5P82970 282 aaKnown RBP14.85□□□□□ -0.03
DDX39A-202ENST00000324340 CATIPQ7Z7H3 387 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 MICU3Q86XE3 530 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 TEPSINQ96N21 525 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 MAP3K14Q99558 947 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 MYL10Q9BUA6 226 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 TMEM39BQ9GZU3 492 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 HACL1Q9UJ83 578 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 ZNF500O60304 480 aaPredicted RBP14.85□□□□□ -0.03
DDX39A-202ENST00000324340 JAK2O60674 1132 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 LMOD1P29536 600 aaPredicted RBP14.85□□□□□ -0.03
DDX39A-202ENST00000324340 CDC27P30260 824 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 HIRAP54198 1017 aaPredicted RBP14.85□□□□□ -0.03
DDX39A-202ENST00000324340 RASA3Q14644 834 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 NTRK3Q16288 839 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 PPP4R3BQ5MIZ7 849 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 DPY19L2Q6NUT2 758 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 FANCBQ8NB91 859 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 TRPM4Q8TD43 1214 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 CEP95Q96GE4 821 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 TRIM34Q9BYJ4 488 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 ADARB2Q9NS39 739 aaKnown RBP14.85□□□□□ -0.03
DDX39A-202ENST00000324340 MTMR4Q9NYA4 1195 aa14.85□□□□□ -0.03
DDX39A-202ENST00000324340 ASTN2O75129 1339 aaPredicted RBP14.84□□□□□ -0.03
DDX39A-202ENST00000324340 PITPNM2Q9BZ72 1349 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 CCDC196A0A1B0GTZ2 297 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 PTPDC1A2A3K4 754 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 CDKL5O76039 1030 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 BRD1O95696 1058 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 SLURP2P0DP57 97 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 RXRAP19793 462 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 ADD1P35611 737 aaKnown RBP14.84□□□□□ -0.03
DDX39A-202ENST00000324340 PKP1Q13835 747 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 RTN1Q16799 776 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 CERKLQ49MI3 558 aaPredicted RBP14.84□□□□□ -0.03
DDX39A-202ENST00000324340 RAB11FIP4Q86YS3 637 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 APOBEC3FQ8IUX4 373 aaKnown RBP14.84□□□□□ -0.03
DDX39A-202ENST00000324340 TMEM47Q9BQJ4 181 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 KAT14Q9H8E8 782 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 ZDHHC9Q9Y397 364 aa14.84□□□□□ -0.03
DDX39A-202ENST00000324340 SCN4AP35499 1836 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 GLTPD2A6NH11 291 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 FAM196BA6NMK8 535 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 DYNC1I1O14576 645 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 CPLX1O14810 134 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
DDX39A-202ENST00000324340 FDPSP14324 419 aaKnown RBP14.83□□□□□ -0.04
DDX39A-202ENST00000324340 IFNAR1P17181 557 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 PDCP20941 246 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 SYT1P21579 422 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 ANGEL2Q5VTE6 544 aaKnown RBP14.83□□□□□ -0.04
DDX39A-202ENST00000324340 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 PNMA1Q8ND90 353 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 RGS22Q8NE09 1264 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.83□□□□□ -0.04
DDX39A-202ENST00000324340 RBM28Q9NW13 759 aaKnown RBP14.83□□□□□ -0.04
DDX39A-202ENST00000324340 STX8Q9UNK0 236 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 PPP2R3BQ9Y5P8 575 aa14.83□□□□□ -0.04
DDX39A-202ENST00000324340 WDR90Q96KV7 1748 aa14.82□□□□□ -0.04
DDX39A-202ENST00000324340 STK36Q9NRP7 1315 aa14.82□□□□□ -0.04
DDX39A-202ENST00000324340 CPLX2Q6PUV4 134 aaKnown RBP14.82□□□□□ -0.04
DDX39A-202ENST00000324340 TMEM179Q6ZVK1 233 aa14.82□□□□□ -0.04
DDX39A-202ENST00000324340 NUP133Q8WUM0 1156 aa14.82□□□□□ -0.04
DDX39A-202ENST00000324340 DEFB129Q9H1M3 183 aa14.82□□□□□ -0.04
DDX39A-202ENST00000324340 KIF3AQ9Y496 699 aa14.82□□□□□ -0.04
DDX39A-202ENST00000324340 STX6O43752 255 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms