RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 POLR3DP05423 398 aaPredicted RBP25.65■■□□□ 1.7
ME3-201ENST00000323418 CYP2D6P10635 497 aa25.65■■□□□ 1.7
ME3-201ENST00000323418 ERVK-9P63128 1117 aa25.65■■□□□ 1.7
ME3-201ENST00000323418 ERVK-24P63145 666 aa25.65■■□□□ 1.7
ME3-201ENST00000323418 RAB3GAP1Q15042 981 aa25.65■■□□□ 1.7
ME3-201ENST00000323418 CRISPLD2Q9H0B8 497 aa25.65■■□□□ 1.7
ME3-201ENST00000323418 BCL11AQ9H165 835 aa25.65■■□□□ 1.7
ME3-201ENST00000323418 CEP290O15078 2479 aa25.65■■□□□ 1.7
ME3-201ENST00000323418 PRKAB2O43741 272 aa25.64■■□□□ 1.7
ME3-201ENST00000323418 CNMDO75829 334 aa25.64■■□□□ 1.7
ME3-201ENST00000323418 TRIM32Q13049 653 aa25.64■■□□□ 1.7
ME3-201ENST00000323418 ZYXQ15942 572 aaKnown RBP25.64■■□□□ 1.7
ME3-201ENST00000323418 HABP4Q5JVS0 413 aaKnown RBP25.64■■□□□ 1.7
ME3-201ENST00000323418 GPRC5AQ8NFJ5 357 aa25.64■■□□□ 1.7
ME3-201ENST00000323418 PORCNQ9H237 461 aa25.64■■□□□ 1.7
ME3-201ENST00000323418 TAOK2Q9UL54 1235 aa25.64■■□□□ 1.7
ME3-201ENST00000323418 MBD4O95243 580 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 HMGCRP04035 888 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 VCAM1P19320 739 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 SEPT2Q15019 361 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 SLC44A5Q8NCS7 719 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 GTF3C2Q8WUA4 911 aaPredicted RBP25.63■■□□□ 1.69
ME3-201ENST00000323418 TRIB2Q92519 343 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 USP6NLQ92738 828 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 DEFB118Q96PH6 123 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 FEZ1Q99689 392 aa25.63■■□□□ 1.69
ME3-201ENST00000323418 SMIM22K7EJ46 135 aa25.62■■□□□ 1.69
ME3-201ENST00000323418 USP14P54578 494 aa25.62■■□□□ 1.69
ME3-201ENST00000323418 UBE3CQ15386 1083 aa25.62■■□□□ 1.69
ME3-201ENST00000323418 CATSPERGQ6ZRH7 1159 aa25.62■■□□□ 1.69
ME3-201ENST00000323418 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.62■■□□□ 1.69
ME3-201ENST00000323418 CABP5Q9NP86 173 aa25.62■■□□□ 1.69
ME3-201ENST00000323418 ZNF236Q9UL36 1845 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 A0A1W2PRG0 241 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L15C9J2P7 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L13C9JLJ4 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L11C9JVI0 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L18D6R9N7 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L22D6RA61 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L17D6RBQ6 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L19D6RCP7 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L20D6RJB6 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 H0YGN5 161 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 FARP2O94887 1054 aaPredicted RBP25.61■■□□□ 1.69
ME3-201ENST00000323418 USP17L24Q0WX57 530 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 LBX2Q6XYB7 198 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 DCTPP1Q9H773 170 aa25.61■■□□□ 1.69
ME3-201ENST00000323418 CAPN2P17655 700 aa25.6■■□□□ 1.69
ME3-201ENST00000323418 MAP3K21Q5TCX8 1036 aa25.6■■□□□ 1.69
ME3-201ENST00000323418 SOCS4Q8WXH5 440 aa25.6■■□□□ 1.69
ME3-201ENST00000323418 DYNLL2Q96FJ2 89 aa25.6■■□□□ 1.69
ME3-201ENST00000323418 PAGR1Q9BTK6 254 aa25.6■■□□□ 1.69
ME3-201ENST00000323418 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.6■■□□□ 1.69
ME3-201ENST00000323418 ATP8A2Q9NTI2 1148 aa25.6■■□□□ 1.69
ME3-201ENST00000323418 RABGAP1Q9Y3P9 1069 aa25.6■■□□□ 1.69
ME3-201ENST00000323418 COL11A1P12107 1806 aaPredicted RBP25.6■■□□□ 1.69
ME3-201ENST00000323418 XRCC5P13010 732 aaKnown RBP25.59■■□□□ 1.69
ME3-201ENST00000323418 MAPK4P31152 587 aa25.59■■□□□ 1.69
ME3-201ENST00000323418 MORN1Q5T089 497 aa25.59■■□□□ 1.69
ME3-201ENST00000323418 GPR142Q7Z601 462 aa25.59■■□□□ 1.69
ME3-201ENST00000323418 SWAP70Q9UH65 585 aa25.59■■□□□ 1.69
ME3-201ENST00000323418 CYP2D7A0A087X1C5 515 aa25.58■■□□□ 1.69
ME3-201ENST00000323418 CYP2B6P20813 491 aa25.58■■□□□ 1.69
ME3-201ENST00000323418 C12orf60Q5U649 245 aa25.58■■□□□ 1.69
ME3-201ENST00000323418 NUDT12Q9BQG2 462 aa25.58■■□□□ 1.69
ME3-201ENST00000323418 PUS7LQ9H0K6 701 aaKnown RBP25.58■■□□□ 1.69
ME3-201ENST00000323418 COLQQ9Y215 455 aaPredicted RBP25.58■■□□□ 1.69
ME3-201ENST00000323418 RPTORQ8N122 1335 aa25.58■■□□□ 1.69
ME3-201ENST00000323418 SPDYE16A6NNV3 312 aaPredicted RBP25.57■■□□□ 1.68
ME3-201ENST00000323418 KIAA1755Q5JYT7 1200 aa25.57■■□□□ 1.68
ME3-201ENST00000323418 SIAH1Q8IUQ4 282 aa25.57■■□□□ 1.68
ME3-201ENST00000323418 RPAP3Q9H6T3 665 aaPredicted RBP25.57■■□□□ 1.68
ME3-201ENST00000323418 ECHDC1Q9NTX5 307 aa25.57■■□□□ 1.68
ME3-201ENST00000323418 BTBD7Q9P203 1132 aa25.57■■□□□ 1.68
ME3-201ENST00000323418 AKR1B1P15121 316 aa25.56■■□□□ 1.68
ME3-201ENST00000323418 MNX1P50219 401 aaPredicted RBP25.56■■□□□ 1.68
ME3-201ENST00000323418 TMEM179Q6ZVK1 233 aa25.56■■□□□ 1.68
ME3-201ENST00000323418 CLEC10AQ8IUN9 316 aa25.56■■□□□ 1.68
ME3-201ENST00000323418 HTATIP2Q9BUP3 242 aa25.56■■□□□ 1.68
ME3-201ENST00000323418 TFRCP02786 760 aaKnown RBP25.55■■□□□ 1.68
ME3-201ENST00000323418 PLEKHH3Q7Z736 793 aa25.55■■□□□ 1.68
ME3-201ENST00000323418 HMX1Q9NP08 348 aaPredicted RBP25.55■■□□□ 1.68
ME3-201ENST00000323418 USP17L12C9JPN9 530 aa25.54■■□□□ 1.68
ME3-201ENST00000323418 USP17L21D6R901 530 aa25.54■■□□□ 1.68
ME3-201ENST00000323418 MPHOSPH10O00566 681 aaKnown RBP25.54■■□□□ 1.68
ME3-201ENST00000323418 CCL14Q16627 93 aa25.54■■□□□ 1.68
ME3-201ENST00000323418 C16orf86Q6ZW13 317 aa25.54■■□□□ 1.68
ME3-201ENST00000323418 DIS3LQ8TF46 1054 aaKnown RBP25.54■■□□□ 1.68
ME3-201ENST00000323418 DPF3Q92784 378 aa25.54■■□□□ 1.68
ME3-201ENST00000323418 PCDHB15Q9Y5E8 787 aa25.54■■□□□ 1.68
ME3-201ENST00000323418 ZNFX1Q9P2E3 1918 aaKnown RBP25.54■■□□□ 1.68
ME3-201ENST00000323418 CDK8P49336 464 aa25.53■■□□□ 1.68
ME3-201ENST00000323418 TSHZ3Q63HK5 1081 aa25.53■■□□□ 1.68
ME3-201ENST00000323418 ZSCAN25Q6NSZ9 544 aa25.53■■□□□ 1.68
ME3-201ENST00000323418 KBTBD3Q8NAB2 608 aa25.53■■□□□ 1.68
ME3-201ENST00000323418 APBA2Q99767 749 aa25.53■■□□□ 1.68
ME3-201ENST00000323418 SLC4A4Q9Y6R1 1079 aa25.53■■□□□ 1.68
ME3-201ENST00000323418 PRKAR2AP13861 404 aaKnown RBP25.52■■□□□ 1.68
ME3-201ENST00000323418 RGS2P41220 211 aa25.52■■□□□ 1.68
ME3-201ENST00000323418 FXR1P51114 621 aaKnown RBP eCLIP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms