RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 NTRK3Q16288 839 aa8.81□□□□□ -1
CD46-201ENST00000322875 TTMPQ5BVD1 217 aa8.81□□□□□ -1
CD46-201ENST00000322875 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
CD46-201ENST00000322875 B4GALNT4Q76KP1 1039 aa8.81□□□□□ -1
CD46-201ENST00000322875 TBC1D22AQ8WUA7 517 aa8.81□□□□□ -1
CD46-201ENST00000322875 HDAC6Q9UBN7 1215 aa8.81□□□□□ -1
CD46-201ENST00000322875 LIMA1Q9UHB6 759 aaKnown RBP8.81□□□□□ -1
CD46-201ENST00000322875 ARFGEF2Q9Y6D5 1785 aa8.81□□□□□ -1
CD46-201ENST00000322875 TMCO5BA8MYB1 307 aa8.81□□□□□ -1
CD46-201ENST00000322875 RNF113AO15541 343 aaKnown RBP8.81□□□□□ -1
CD46-201ENST00000322875 SMTNP53814 917 aa8.81□□□□□ -1
CD46-201ENST00000322875 ALG1Q9BT22 464 aa8.81□□□□□ -1
CD46-201ENST00000322875 GPR108Q9NPR9 543 aa8.81□□□□□ -1
CD46-201ENST00000322875 LRP6O75581 1613 aa8.8□□□□□ -1
CD46-201ENST00000322875 PPP1R3GB7ZBB8 358 aa8.8□□□□□ -1
CD46-201ENST00000322875 PDE2AO00408 941 aaPredicted RBP8.8□□□□□ -1
CD46-201ENST00000322875 SCP2P22307 547 aa8.8□□□□□ -1
CD46-201ENST00000322875 ITIH3Q06033 890 aa8.8□□□□□ -1
CD46-201ENST00000322875 LRP10Q7Z4F1 713 aa8.8□□□□□ -1
CD46-201ENST00000322875 MAGEC3Q8TD91 643 aa8.8□□□□□ -1
CD46-201ENST00000322875 PURBQ96QR8 312 aaKnown RBP8.8□□□□□ -1
CD46-201ENST00000322875 CRACR2AQ9BSW2 395 aa8.8□□□□□ -1
CD46-201ENST00000322875 VCPKMTQ9H867 229 aa8.8□□□□□ -1
CD46-201ENST00000322875 CD248Q9HCU0 757 aa8.8□□□□□ -1
CD46-201ENST00000322875 TRIM10Q9UDY6 481 aa8.8□□□□□ -1
CD46-201ENST00000322875 SAR1BQ9Y6B6 198 aa8.8□□□□□ -1
CD46-201ENST00000322875 PPP1R12AO14974 1030 aaPredicted RBP8.8□□□□□ -1
CD46-201ENST00000322875 RTN2O75298 545 aa8.8□□□□□ -1
CD46-201ENST00000322875 DDX58O95786 925 aaKnown RBP8.8□□□□□ -1
CD46-201ENST00000322875 TDO2P48775 406 aa8.8□□□□□ -1
CD46-201ENST00000322875 CASP7P55210 303 aa8.8□□□□□ -1
CD46-201ENST00000322875 HERVK_113P62684 666 aa8.8□□□□□ -1
CD46-201ENST00000322875 ACTN3Q08043 901 aaPredicted RBP8.8□□□□□ -1
CD46-201ENST00000322875 C6orf89Q6UWU4 347 aa8.8□□□□□ -1
CD46-201ENST00000322875 GSPT2Q8IYD1 628 aaKnown RBP8.8□□□□□ -1
CD46-201ENST00000322875 GRAMD1CQ8IYS0 662 aa8.8□□□□□ -1
CD46-201ENST00000322875 MMGT1Q8N4V1 131 aa8.8□□□□□ -1
CD46-201ENST00000322875 CPLX3Q8WVH0 158 aa8.8□□□□□ -1
CD46-201ENST00000322875 OSBP2Q969R2 916 aa8.8□□□□□ -1
CD46-201ENST00000322875 HAUS4Q9H6D7 363 aa8.8□□□□□ -1
CD46-201ENST00000322875 SRRM3A6NNA2 597 aaPredicted RBP8.79□□□□□ -1
CD46-201ENST00000322875 GOLIM4O00461 696 aa8.79□□□□□ -1
CD46-201ENST00000322875 POLR2DO15514 142 aaKnown RBP8.79□□□□□ -1
CD46-201ENST00000322875 NDUFA10O95299 355 aa8.79□□□□□ -1
CD46-201ENST00000322875 TNFRSF8P28908 595 aa8.79□□□□□ -1
CD46-201ENST00000322875 NAP1L1P55209 391 aaKnown RBP8.79□□□□□ -1
CD46-201ENST00000322875 KANK3Q6NY19 840 aa8.79□□□□□ -1
CD46-201ENST00000322875 USHBP1Q8N6Y0 703 aa8.79□□□□□ -1
CD46-201ENST00000322875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.79□□□□□ -1
CD46-201ENST00000322875 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
CD46-201ENST00000322875 NID2Q14112 1375 aa8.79□□□□□ -1
CD46-201ENST00000322875 SYNRGQ9UMZ2 1314 aa8.79□□□□□ -1
CD46-201ENST00000322875 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
CD46-201ENST00000322875 RNMTO43148 476 aaKnown RBP8.79□□□□□ -1
CD46-201ENST00000322875 RANBP6O60518 1105 aaKnown RBP8.79□□□□□ -1
CD46-201ENST00000322875 CKAP4Q07065 602 aaKnown RBP8.79□□□□□ -1
CD46-201ENST00000322875 TRIM14Q14142 442 aa8.79□□□□□ -1
CD46-201ENST00000322875 SPECC1Q5M775 1068 aa8.79□□□□□ -1
CD46-201ENST00000322875 TLDC1Q6P9B6 456 aa8.79□□□□□ -1
CD46-201ENST00000322875 ATG9AQ7Z3C6 839 aa8.79□□□□□ -1
CD46-201ENST00000322875 NKX2-3Q8TAU0 364 aa8.79□□□□□ -1
CD46-201ENST00000322875 METTL22Q9BUU2 404 aaPredicted RBP8.79□□□□□ -1
CD46-201ENST00000322875 SAMM50Q9Y512 469 aa8.79□□□□□ -1
CD46-201ENST00000322875 STK36Q9NRP7 1315 aa8.79□□□□□ -1
CD46-201ENST00000322875 CPLX1O14810 134 aa8.79□□□□□ -1
CD46-201ENST00000322875 SRGAP2O75044 1071 aa8.79□□□□□ -1
CD46-201ENST00000322875 CLSTN1O94985 981 aa8.79□□□□□ -1
CD46-201ENST00000322875 GCFC2P16383 781 aaKnown RBP8.79□□□□□ -1
CD46-201ENST00000322875 SKIDA1Q1XH10 827 aa8.79□□□□□ -1
CD46-201ENST00000322875 ALS2CLQ60I27 953 aa8.79□□□□□ -1
CD46-201ENST00000322875 CAVIN3Q969G5 261 aa8.79□□□□□ -1
CD46-201ENST00000322875 FAM212AQ96EL1 285 aa8.79□□□□□ -1
CD46-201ENST00000322875 RRP36Q96EU6 259 aaKnown RBP8.79□□□□□ -1
CD46-201ENST00000322875 DNAJC7Q99615 494 aa8.79□□□□□ -1
CD46-201ENST00000322875 SLF1Q9BQI6 1058 aa8.79□□□□□ -1
CD46-201ENST00000322875 KLC4Q9NSK0 619 aa8.79□□□□□ -1
CD46-201ENST00000322875 EPN1Q9Y6I3 576 aaPredicted RBP8.79□□□□□ -1
CD46-201ENST00000322875 MYH7P12883 1935 aa8.79□□□□□ -1
CD46-201ENST00000322875 UBN2Q6ZU65 1347 aa8.78□□□□□ -1
CD46-201ENST00000322875 ANO9A1A5B4 782 aa8.78□□□□□ -1
CD46-201ENST00000322875 ENC1O14682 589 aa8.78□□□□□ -1
CD46-201ENST00000322875 ZMYND10O75800 440 aa8.78□□□□□ -1
CD46-201ENST00000322875 FGAP02671 866 aa8.78□□□□□ -1
CD46-201ENST00000322875 DPYDQ12882 1025 aa8.78□□□□□ -1
CD46-201ENST00000322875 KDM7AQ6ZMT4 941 aa8.78□□□□□ -1
CD46-201ENST00000322875 FAM228AQ86W67 206 aa8.78□□□□□ -1
CD46-201ENST00000322875 EGFL6Q8IUX8 553 aa8.78□□□□□ -1
CD46-201ENST00000322875 ANKRD18AQ8IVF6 992 aa8.78□□□□□ -1
CD46-201ENST00000322875 C1orf131Q8NDD1 294 aaKnown RBP8.78□□□□□ -1
CD46-201ENST00000322875 ARL8AQ96BM9 186 aa8.78□□□□□ -1
CD46-201ENST00000322875 GDAP1L1Q96MZ0 367 aa8.78□□□□□ -1
CD46-201ENST00000322875 CHP1Q99653 195 aa8.78□□□□□ -1
CD46-201ENST00000322875 SRPRBQ9Y5M8 271 aaKnown RBP8.78□□□□□ -1
CD46-201ENST00000322875 TJP1Q07157 1748 aa8.78□□□□□ -1
CD46-201ENST00000322875 CDC25AP30304 524 aa8.78□□□□□ -1
CD46-201ENST00000322875 SETQ01105 290 aaPredicted RBP8.78□□□□□ -1
CD46-201ENST00000322875 DRP2Q13474 957 aa8.78□□□□□ -1
CD46-201ENST00000322875 CRYMQ14894 314 aa8.78□□□□□ -1
CD46-201ENST00000322875 KRT31Q15323 416 aa8.78□□□□□ -1
CD46-201ENST00000322875 WDR59Q6PJI9 974 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms