RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 USP14P54578 494 aa23.66■■□□□ 1.38
HIGD1A-201ENST00000321331 C17orf99Q6UX52 265 aa23.66■■□□□ 1.38
HIGD1A-201ENST00000321331 SMCR8Q8TEV9 937 aaPredicted RBP23.66■■□□□ 1.38
HIGD1A-201ENST00000321331 MCOLN1Q9GZU1 580 aa23.66■■□□□ 1.38
HIGD1A-201ENST00000321331 GSPT1P15170 499 aaKnown RBP23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 OSBPP22059 807 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 ARHGEF6Q15052 776 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 PKN2Q16513 984 aaKnown RBP23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 STK11IPQ8N1F8 1099 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 CD99L2Q8TCZ2 262 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 CCDC136Q96JN2 1154 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 KIAA1683Q9H0B3 1180 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 CPA4Q9UI42 421 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 CCDC171Q6TFL3 1326 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 PPARAQ07869 468 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 VPS53Q5VIR6 699 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 CWC27Q6UX04 472 aaKnown RBP23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 ADGRA2Q96PE1 1338 aa23.65■■□□□ 1.38
HIGD1A-201ENST00000321331 FOXP2O15409 715 aa23.64■■□□□ 1.37
HIGD1A-201ENST00000321331 PDE4BQ07343 736 aa23.64■■□□□ 1.37
HIGD1A-201ENST00000321331 KIF22Q14807 665 aa23.64■■□□□ 1.37
HIGD1A-201ENST00000321331 ZNF589Q86UQ0 364 aaPredicted RBP23.64■■□□□ 1.37
HIGD1A-201ENST00000321331 ACER1Q8TDN7 264 aa23.64■■□□□ 1.37
HIGD1A-201ENST00000321331 C12orf42Q96LP6 360 aa23.64■■□□□ 1.37
HIGD1A-201ENST00000321331 ARHGEF10LQ9HCE6 1279 aa23.64■■□□□ 1.37
HIGD1A-201ENST00000321331 EMILIN3Q9NT22 766 aa23.64■■□□□ 1.37
HIGD1A-201ENST00000321331 HSPD1P10809 573 aaKnown RBP23.63■■□□□ 1.37
HIGD1A-201ENST00000321331 ICA1Q05084 483 aa23.63■■□□□ 1.37
HIGD1A-201ENST00000321331 ALX1Q15699 326 aa23.63■■□□□ 1.37
HIGD1A-201ENST00000321331 ZYXQ15942 572 aaKnown RBP23.63■■□□□ 1.37
HIGD1A-201ENST00000321331 ZNF444Q8N0Y2 327 aaPredicted RBP23.63■■□□□ 1.37
HIGD1A-201ENST00000321331 SH2D4AQ9H788 454 aa23.63■■□□□ 1.37
HIGD1A-201ENST00000321331 TRIM17Q9Y577 477 aa23.63■■□□□ 1.37
HIGD1A-201ENST00000321331 RASA1P20936 1047 aa23.62■■□□□ 1.37
HIGD1A-201ENST00000321331 HOXA7P31268 230 aaPredicted RBP23.62■■□□□ 1.37
HIGD1A-201ENST00000321331 IRX3P78415 501 aaPredicted RBP23.62■■□□□ 1.37
HIGD1A-201ENST00000321331 ASCC2Q9H1I8 757 aaPredicted RBP23.62■■□□□ 1.37
HIGD1A-201ENST00000321331 KANSL2Q9H9L4 492 aa23.62■■□□□ 1.37
HIGD1A-201ENST00000321331 EFCC1Q9HA90 598 aa23.62■■□□□ 1.37
HIGD1A-201ENST00000321331 BCRP11274 1271 aa23.61■■□□□ 1.37
HIGD1A-201ENST00000321331 LACTBP83111 547 aaPredicted RBP23.61■■□□□ 1.37
HIGD1A-201ENST00000321331 ABHD8Q96I13 439 aa23.61■■□□□ 1.37
HIGD1A-201ENST00000321331 ZMYM6O95789 1325 aa23.6■■□□□ 1.37
HIGD1A-201ENST00000321331 FGAP02671 866 aa23.6■■□□□ 1.37
HIGD1A-201ENST00000321331 GCLCP48506 637 aaPredicted RBP23.6■■□□□ 1.37
HIGD1A-201ENST00000321331 OTOP1Q7RTM1 612 aa23.6■■□□□ 1.37
HIGD1A-201ENST00000321331 A0A1W2PRG0 241 aa23.59■■□□□ 1.37
HIGD1A-201ENST00000321331 PRDM1O75626 825 aa23.59■■□□□ 1.37
HIGD1A-201ENST00000321331 ANAPC4Q9UJX5 808 aa23.59■■□□□ 1.37
HIGD1A-201ENST00000321331 TMX2Q9Y320 296 aa23.59■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L15C9J2P7 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L13C9JLJ4 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L11C9JVI0 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L18D6R9N7 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L22D6RA61 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L17D6RBQ6 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L19D6RCP7 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L20D6RJB6 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 VCAM1P19320 739 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 ATP2B2Q01814 1243 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 USP17L24Q0WX57 530 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 FBXO46Q6PJ61 603 aaPredicted RBP23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 CLEC10AQ8IUN9 316 aa23.58■■□□□ 1.37
HIGD1A-201ENST00000321331 GNRH1P01148 92 aa23.57■■□□□ 1.36
HIGD1A-201ENST00000321331 EEF2P13639 858 aaKnown RBP23.57■■□□□ 1.36
HIGD1A-201ENST00000321331 CTDSPL2Q05D32 466 aa23.57■■□□□ 1.36
HIGD1A-201ENST00000321331 IFFO2Q5TF58 517 aa23.57■■□□□ 1.36
HIGD1A-201ENST00000321331 RUFY2Q8WXA3 655 aa23.57■■□□□ 1.36
HIGD1A-201ENST00000321331 TSPY3P0CV98 308 aa23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 TSPY8P0CW00 308 aa23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 FAM110CQ1W6H9 321 aa23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 SIAH1Q8IUQ4 282 aa23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 ANKRD13CQ8N6S4 541 aa23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 GTF3C2Q8WUA4 911 aaPredicted RBP23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 LPAR1Q92633 364 aa23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 P2RX7Q99572 595 aaKnown RBP23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 RAD50Q92878 1312 aa23.56■■□□□ 1.36
HIGD1A-201ENST00000321331 GREB1LQ9C091 1923 aaPredicted RBP23.55■■□□□ 1.36
HIGD1A-201ENST00000321331 PSMC4P43686 418 aa23.55■■□□□ 1.36
HIGD1A-201ENST00000321331 HERVK_113P62684 666 aa23.55■■□□□ 1.36
HIGD1A-201ENST00000321331 ARHGAP39Q9C0H5 1083 aa23.55■■□□□ 1.36
HIGD1A-201ENST00000321331 RPAP3Q9H6T3 665 aaPredicted RBP23.55■■□□□ 1.36
HIGD1A-201ENST00000321331 VCPKMTQ9H867 229 aa23.55■■□□□ 1.36
HIGD1A-201ENST00000321331 FMNL1O95466 1100 aaPredicted RBP23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 CHMLP26374 656 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 FCGRTP55899 365 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 CAP1Q01518 475 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 ERICH6BQ5W0A0 696 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 CATSPERGQ6ZRH7 1159 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 NEDD1Q8NHV4 660 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 DSCC1Q9BVC3 393 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 GOPCQ9HD26 462 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 PTPN22Q9Y2R2 807 aa23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.54■■□□□ 1.36
HIGD1A-201ENST00000321331 ECM2O94769 699 aaPredicted RBP23.53■■□□□ 1.36
HIGD1A-201ENST00000321331 HOXD10P28358 340 aa23.53■■□□□ 1.36
HIGD1A-201ENST00000321331 TFAP4Q01664 338 aa23.53■■□□□ 1.36
HIGD1A-201ENST00000321331 NYAP2Q9P242 653 aa23.53■■□□□ 1.36
HIGD1A-201ENST00000321331 HPS5Q9UPZ3 1129 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms