RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 POLD4Q9HCU8 107 aa10.94□□□□□ -0.66
PTPRA-202ENST00000318266 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.94□□□□□ -0.66
PTPRA-202ENST00000318266 PPFIA4O75335 1185 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 CASP7P55210 303 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 CHP1Q99653 195 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 ADD3Q9UEY8 706 aaKnown RBP10.93□□□□□ -0.66
PTPRA-202ENST00000318266 FBXO2Q9UK22 296 aaPredicted RBP10.93□□□□□ -0.66
PTPRA-202ENST00000318266 hCG_1642624A0A1W2PR95 340 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 SH2B2O14492 632 aaPredicted RBP10.93□□□□□ -0.66
PTPRA-202ENST00000318266 GGCXP38435 758 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 SSRP1Q08945 709 aaKnown RBP10.93□□□□□ -0.66
PTPRA-202ENST00000318266 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTPRA-202ENST00000318266 FILIP1LQ4L180 1135 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 APTXQ7Z2E3 356 aaKnown RBP10.93□□□□□ -0.66
PTPRA-202ENST00000318266 OXER1Q8TDS5 423 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 APPBP2Q92624 585 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 MMS19Q96T76 1030 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 CABP5Q9NP86 173 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 MED4Q9NPJ6 270 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 TAB2Q9NYJ8 693 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 CTNND2Q9UQB3 1225 aa10.93□□□□□ -0.66
PTPRA-202ENST00000318266 RGPD2P0DJD1 1756 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 A0A087X0B3 334 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 FAM237AA0A1B0GTK4 181 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 A1BGP04217 495 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 SNRPA1P09661 255 aaKnown RBP10.92□□□□□ -0.66
PTPRA-202ENST00000318266 BAG6P46379 1132 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 WHAMMP3Q1A5X7 153 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 TADA2BQ86TJ2 420 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 FBXL16Q8N461 479 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 RAPGEF4Q8WZA2 1011 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 BLZF1Q9H2G9 400 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 TTF2Q9UNY4 1162 aaKnown RBP10.92□□□□□ -0.66
PTPRA-202ENST00000318266 IFIT3O14879 490 aaKnown RBP10.92□□□□□ -0.66
PTPRA-202ENST00000318266 RPS6KA5O75582 802 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 ARHGAP25P42331 645 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 SARSP49591 514 aaKnown RBP10.92□□□□□ -0.66
PTPRA-202ENST00000318266 SPATA1Q5VX52 437 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 FBXW10Q5XX13 1052 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 LRP10Q7Z4F1 713 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 CRACR2AQ9BSW2 395 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 WWC3Q9ULE0 1092 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 SLC12A7Q9Y666 1083 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 ACTN4O43707 911 aaKnown RBP10.92□□□□□ -0.66
PTPRA-202ENST00000318266 MYBL2P10244 700 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 PTPREP23469 700 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 KRT9P35527 623 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 PPARDQ03181 441 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 STIM1Q13586 685 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 CNGA4Q8IV77 575 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 KCNH5Q8NCM2 988 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 CAGE1Q8TC20 777 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 NUP133Q8WUM0 1156 aa10.92□□□□□ -0.66
PTPRA-202ENST00000318266 NAA15Q9BXJ9 866 aaKnown RBP10.92□□□□□ -0.66
PTPRA-202ENST00000318266 FAM217BQ9NTX9 383 aaPredicted RBP10.92□□□□□ -0.66
PTPRA-202ENST00000318266 CPDO75976 1380 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 ATP1A1P05023 1023 aaKnown RBP10.91□□□□□ -0.66
PTPRA-202ENST00000318266 DPYDQ12882 1025 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 NTRK3Q16288 839 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 GPIHBP1Q8IV16 184 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 EEF2KMTQ96G04 330 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 KAT14Q9H8E8 782 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 ABHD10Q9NUJ1 306 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 HPCAL4Q9UM19 191 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 SAMM50Q9Y512 469 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 ZNF185O15231 689 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 EFCAB13Q8IY85 973 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 KAT2BQ92831 832 aa10.91□□□□□ -0.66
PTPRA-202ENST00000318266 CWC25Q9NXE8 425 aaPredicted RBP10.91□□□□□ -0.66
PTPRA-202ENST00000318266 EXOC5O00471 708 aa10.9□□□□□ -0.66
PTPRA-202ENST00000318266 MNAT1P51948 309 aa10.9□□□□□ -0.66
PTPRA-202ENST00000318266 CCDC57Q2TAC2 916 aa10.9□□□□□ -0.66
PTPRA-202ENST00000318266 PLBD2Q8NHP8 589 aa10.9□□□□□ -0.66
PTPRA-202ENST00000318266 ERLIN2O94905 339 aa10.9□□□□□ -0.66
PTPRA-202ENST00000318266 PRPF6O94906 941 aaKnown RBP10.9□□□□□ -0.66
PTPRA-202ENST00000318266 ERCC5P28715 1186 aaPredicted RBP10.9□□□□□ -0.66
PTPRA-202ENST00000318266 KRT31Q15323 416 aa10.9□□□□□ -0.66
PTPRA-202ENST00000318266 ORAI2Q96SN7 254 aa10.9□□□□□ -0.66
PTPRA-202ENST00000318266 LTN1O94822 1766 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 GOLGA6CA6NDK9 693 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 MMP1P03956 469 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 GOLGA6DP0CG33 693 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 IBSPP21815 317 aaPredicted RBP10.9□□□□□ -0.67
PTPRA-202ENST00000318266 USP14P54578 494 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 AMPD2Q01433 879 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 NT5DC1Q5TFE4 455 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 TMTC1Q8IUR5 882 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 LY9Q9HBG7 655 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 GOLGA6AQ9NYA3 693 aa10.9□□□□□ -0.67
PTPRA-202ENST00000318266 H7C1W4 665 aa10.89□□□□□ -0.67
PTPRA-202ENST00000318266 ZFYP08048 801 aaPredicted RBP10.89□□□□□ -0.67
PTPRA-202ENST00000318266 MATR3P43243 847 aaKnown RBP eCLIP10.89□□□□□ -0.673e-7■■■■□ 23.1
PTPRA-202ENST00000318266 CCDC122Q5T0U0 273 aa10.89□□□□□ -0.67
PTPRA-202ENST00000318266 CYP26C1Q6V0L0 522 aa10.89□□□□□ -0.67
PTPRA-202ENST00000318266 FAM76AQ8TAV0 307 aa10.89□□□□□ -0.67
PTPRA-202ENST00000318266 BCAS4Q8TDM0 211 aa10.89□□□□□ -0.67
PTPRA-202ENST00000318266 MYCBPQ99417 103 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms