RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 EFCC1Q9HA90 598 aa18.24■□□□□ 0.51
CRAT-201ENST00000318080 PCDHB6Q9Y5E3 794 aa18.24■□□□□ 0.51
CRAT-201ENST00000318080 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
CRAT-201ENST00000318080 TPM1P09493 284 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 BEND6Q5SZJ8 279 aaPredicted RBP18.23■□□□□ 0.51
CRAT-201ENST00000318080 GPATCH11Q8N954 259 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
CRAT-201ENST00000318080 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 MAP2K7O14733 419 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 STX10O60499 249 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 CRKLP46109 303 aaKnown RBP18.23■□□□□ 0.51
CRAT-201ENST00000318080 STX17P56962 302 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 TRIM29Q14134 588 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 HLFQ16534 295 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 METTL24Q5JXM2 366 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 NOSTRINQ8IVI9 506 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 ZSWIM5Q9P217 1185 aa18.23■□□□□ 0.51
CRAT-201ENST00000318080 FBXO2Q9UK22 296 aaPredicted RBP18.23■□□□□ 0.51
CRAT-201ENST00000318080 VSNL1P62760 191 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 INTS5Q6P9B9 1019 aaKnown RBP18.22■□□□□ 0.51
CRAT-201ENST00000318080 RAD9BQ6WBX8 426 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 OXER1Q8TDS5 423 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 ISCA1Q9BUE6 129 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
CRAT-201ENST00000318080 SNAP23O00161 211 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 ATP8B1O43520 1251 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 CDKL5O76039 1030 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 ICE2Q659A1 982 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 DIS3L2Q8IYB7 885 aaKnown RBP18.22■□□□□ 0.51
CRAT-201ENST00000318080 LINC00116Q8NCU8 138 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 BCCIPQ9P287 314 aaKnown RBP eCLIP18.22■□□□□ 0.51
CRAT-201ENST00000318080 WDR19Q8NEZ3 1342 aa18.22■□□□□ 0.51
CRAT-201ENST00000318080 IFIT5Q13325 482 aaKnown RBP18.21■□□□□ 0.51
CRAT-201ENST00000318080 MORC3Q14149 939 aa18.21■□□□□ 0.51
CRAT-201ENST00000318080 KLHL10Q6JEL2 608 aa18.21■□□□□ 0.51
CRAT-201ENST00000318080 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.21■□□□□ 0.51
CRAT-201ENST00000318080 RIN2Q8WYP3 895 aaPredicted RBP18.21■□□□□ 0.51
CRAT-201ENST00000318080 GOLGB1Q14789 3259 aaKnown RBP18.21■□□□□ 0.51
CRAT-201ENST00000318080 FAM205CA6NFA0 338 aa18.21■□□□□ 0.51
CRAT-201ENST00000318080 GPTP24298 496 aa18.21■□□□□ 0.51
CRAT-201ENST00000318080 PHKA1P46020 1223 aa18.21■□□□□ 0.51
CRAT-201ENST00000318080 SARSP49591 514 aaKnown RBP18.21■□□□□ 0.51
CRAT-201ENST00000318080 LRRC31Q6UY01 552 aa18.21■□□□□ 0.51
CRAT-201ENST00000318080 SMYD4Q8IYR2 804 aaPredicted RBP18.21■□□□□ 0.51
CRAT-201ENST00000318080 GREM2Q9H772 168 aa18.21■□□□□ 0.51
CRAT-201ENST00000318080 EPB41L4AQ9HCS5 686 aaPredicted RBP18.21■□□□□ 0.51
CRAT-201ENST00000318080 RAI14Q9P0K7 980 aa18.21■□□□□ 0.51
CRAT-201ENST00000318080 TCIRG1Q13488 830 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 NR1I3Q14994 352 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 TTC31Q49AM3 519 aaPredicted RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 JAKMIP3Q5VZ66 844 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 CPLX2Q6PUV4 134 aaKnown RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 POTEAQ6S8J7 498 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 LDHAL6AQ6ZMR3 332 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 AMIGO3Q86WK7 504 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 HELBQ8NG08 1087 aaPredicted RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 GEMIN8Q9NWZ8 242 aaKnown RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 JRKLQ9Y4A0 524 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 RIPOR2Q9Y4F9 1068 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 BTAF1O14981 1849 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 A0A087X0B3 334 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 IFIT3O14879 490 aaKnown RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 TRIM37O94972 964 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 CD44P16070 742 aaKnown RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 PDE6AP16499 860 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 SSRP1Q08945 709 aaKnown RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 RBL2Q08999 1139 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 RRP12Q5JTH9 1297 aaKnown RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
CRAT-201ENST00000318080 RIC1Q4ADV7 1423 aa18.2■□□□□ 0.5
CRAT-201ENST00000318080 PTPREP23469 700 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 ENOX1Q8TC92 643 aaKnown RBP18.19■□□□□ 0.5
CRAT-201ENST00000318080 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.19■□□□□ 0.5
CRAT-201ENST00000318080 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 CCDC151A5D8V7 595 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 LRRIQ3A6PVS8 624 aaPredicted RBP18.19■□□□□ 0.5
CRAT-201ENST00000318080 CLGNO14967 610 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 MMP1P03956 469 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 APTXQ7Z2E3 356 aaKnown RBP18.19■□□□□ 0.5
CRAT-201ENST00000318080 CSRNP2Q9H175 543 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 ACTN4O43707 911 aaKnown RBP18.19■□□□□ 0.5
CRAT-201ENST00000318080 PRKAB2O43741 272 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 AFMP43652 599 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 FBXO41Q8TF61 875 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 SHISA4Q96DD7 197 aa18.19■□□□□ 0.5
CRAT-201ENST00000318080 STRBPQ96SI9 672 aaKnown RBP18.19■□□□□ 0.5
CRAT-201ENST00000318080 ZMYND10O75800 440 aa18.18■□□□□ 0.5
CRAT-201ENST00000318080 ITGA6P23229 1130 aa18.18■□□□□ 0.5
CRAT-201ENST00000318080 NT5DC1Q5TFE4 455 aa18.18■□□□□ 0.5
CRAT-201ENST00000318080 NOA1Q8NC60 698 aaKnown RBP18.18■□□□□ 0.5
CRAT-201ENST00000318080 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
CRAT-201ENST00000318080 MYO5AQ9Y4I1 1855 aaKnown RBP18.18■□□□□ 0.5
CRAT-201ENST00000318080 SMIM22K7EJ46 135 aa18.18■□□□□ 0.5
CRAT-201ENST00000318080 FMNL1O95466 1100 aaPredicted RBP18.18■□□□□ 0.5
CRAT-201ENST00000318080 CSF1RP07333 972 aa18.18■□□□□ 0.5
CRAT-201ENST00000318080 KIF4BQ2VIQ3 1234 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms