RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 MUM1L1Q5H9M0 696 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 CEP112Q8N8E3 955 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 CCDC51Q96ER9 411 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 PAGE5Q96GU1 130 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 COL22A1Q8NFW1 1626 aaPredicted RBP21.72■■□□□ 1.07
RTN4-201ENST00000317610 ITIH6Q6UXX5 1313 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 TRIM75PA6NK02 468 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 KIF5CO60282 957 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 SLC5A1P13866 664 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 ST5P78524 1137 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 PPP2R5BQ15173 497 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 SHISA4Q96DD7 197 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 GSDMAQ96QA5 445 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 TRMT112Q9UI30 125 aaKnown RBP21.72■■□□□ 1.07
RTN4-201ENST00000317610 RAB21Q9UL25 225 aa21.72■■□□□ 1.07
RTN4-201ENST00000317610 NHSL1Q5SYE7 1610 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 POTEB2H3BUK9 544 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 USP5P45974 858 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 TDO2P48775 406 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 TUBB4BP68371 445 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 DPYDQ12882 1025 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 RRP12Q5JTH9 1297 aaKnown RBP21.71■■□□□ 1.07
RTN4-201ENST00000317610 CMTR1Q8N1G2 835 aaKnown RBP21.71■■□□□ 1.07
RTN4-201ENST00000317610 LCORLQ8N3X6 602 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 MSL3Q8N5Y2 521 aaKnown RBP21.71■■□□□ 1.07
RTN4-201ENST00000317610 MSANTD4Q8NCY6 345 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 PIGBQ92521 554 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 RNF41Q9H4P4 317 aaPredicted RBP21.71■■□□□ 1.07
RTN4-201ENST00000317610 ZCCHC17Q9NP64 241 aaKnown RBP21.71■■□□□ 1.07
RTN4-201ENST00000317610 IRX5P78411 483 aaPredicted RBP21.71■■□□□ 1.07
RTN4-201ENST00000317610 GPS2Q13227 327 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 ANKZF1Q9H8Y5 726 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 LZTFL1Q9NQ48 299 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 PSD3Q9NYI0 1048 aa21.71■■□□□ 1.07
RTN4-201ENST00000317610 PPP1R3GB7ZBB8 358 aa21.7■■□□□ 1.06
RTN4-201ENST00000317610 CCDC82Q8N4S0 544 aa21.7■■□□□ 1.06
RTN4-201ENST00000317610 NEK11Q8NG66 645 aa21.7■■□□□ 1.06
RTN4-201ENST00000317610 FERMT2Q96AC1 680 aa21.7■■□□□ 1.06
RTN4-201ENST00000317610 SLC4A4Q9Y6R1 1079 aa21.7■■□□□ 1.06
RTN4-201ENST00000317610 ITGB4P16144 1822 aa21.7■■□□□ 1.06
RTN4-201ENST00000317610 BMP15O95972 392 aa21.69■■□□□ 1.06
RTN4-201ENST00000317610 SEC23AQ15436 765 aa21.69■■□□□ 1.06
RTN4-201ENST00000317610 CNGA4Q8IV77 575 aa21.69■■□□□ 1.06
RTN4-201ENST00000317610 HELBQ8NG08 1087 aaPredicted RBP21.69■■□□□ 1.06
RTN4-201ENST00000317610 EPSTI1Q96J88 318 aa21.69■■□□□ 1.06
RTN4-201ENST00000317610 PHF20Q9BVI0 1012 aa21.69■■□□□ 1.06
RTN4-201ENST00000317610 ATP2B1P20020 1258 aa21.69■■□□□ 1.06
RTN4-201ENST00000317610 FILIP1LQ4L180 1135 aa21.69■■□□□ 1.06
RTN4-201ENST00000317610 RTL9Q8NET4 1388 aa21.69■■□□□ 1.06
RTN4-201ENST00000317610 A0A0U1RQJ8 604 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 PKN1Q16512 942 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 NUP133Q8WUM0 1156 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 ATRIPQ8WXE1 791 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 SYMPKQ92797 1274 aaKnown RBP21.68■■□□□ 1.06
RTN4-201ENST00000317610 EXOC4Q96A65 974 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 AK7Q96M32 723 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 TOMM22Q9NS69 142 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 TTF2Q9UNY4 1162 aaKnown RBP21.68■■□□□ 1.06
RTN4-201ENST00000317610 FAM205CA6NFA0 338 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 GYPCP04921 128 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 XBP1P17861 261 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 AFMP43652 599 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 STX17P56962 302 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 BEND6Q5SZJ8 279 aaPredicted RBP21.68■■□□□ 1.06
RTN4-201ENST00000317610 KLHL10Q6JEL2 608 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 TMEM51Q9NW97 253 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 ABCA3Q99758 1704 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 MYH2Q9UKX2 1941 aa21.68■■□□□ 1.06
RTN4-201ENST00000317610 KRT2P35908 639 aa21.67■■□□□ 1.06
RTN4-201ENST00000317610 FUT2Q10981 343 aa21.67■■□□□ 1.06
RTN4-201ENST00000317610 ANAPC4Q9UJX5 808 aa21.67■■□□□ 1.06
RTN4-201ENST00000317610 ERVV-1B6SEH8 477 aa21.67■■□□□ 1.06
RTN4-201ENST00000317610 H3BQF6 201 aa21.67■■□□□ 1.06
RTN4-201ENST00000317610 CYP19A1P11511 503 aaPredicted RBP21.67■■□□□ 1.06
RTN4-201ENST00000317610 CASP14P31944 242 aa21.67■■□□□ 1.06
RTN4-201ENST00000317610 PPARAQ07869 468 aa21.67■■□□□ 1.06
RTN4-201ENST00000317610 EARS2Q5JPH6 523 aaKnown RBP21.67■■□□□ 1.06
RTN4-201ENST00000317610 UBAC1Q9BSL1 405 aa21.67■■□□□ 1.06
RTN4-201ENST00000317610 LIMA1Q9UHB6 759 aaKnown RBP21.67■■□□□ 1.06
RTN4-201ENST00000317610 LRRC10BA6NIK2 292 aa21.66■■□□□ 1.06
RTN4-201ENST00000317610 ZNF569Q5MCW4 686 aa21.66■■□□□ 1.06
RTN4-201ENST00000317610 CPLX3Q8WVH0 158 aa21.66■■□□□ 1.06
RTN4-201ENST00000317610 SLIT2O94813 1529 aa21.66■■□□□ 1.06
RTN4-201ENST00000317610 CTAGE9A4FU28 777 aa21.66■■□□□ 1.06
RTN4-201ENST00000317610 PRPF3O43395 683 aaKnown RBP21.66■■□□□ 1.06
RTN4-201ENST00000317610 FXR1P51114 621 aaKnown RBP eCLIP21.66■■□□□ 1.069e-8■■■■□ 20
RTN4-201ENST00000317610 TMTC1Q8IUR5 882 aa21.66■■□□□ 1.06
RTN4-201ENST00000317610 VPS54Q9P1Q0 977 aa21.66■■□□□ 1.06
RTN4-201ENST00000317610 MYH8P13535 1937 aa21.65■■□□□ 1.06
RTN4-201ENST00000317610 TNKSO95271 1327 aa21.65■■□□□ 1.06
RTN4-201ENST00000317610 CASP1P29466 404 aa21.65■■□□□ 1.06
RTN4-201ENST00000317610 AKAP17AQ02040 695 aaKnown RBP21.65■■□□□ 1.06
RTN4-201ENST00000317610 ZNF34Q8IZ26 560 aa21.65■■□□□ 1.06
RTN4-201ENST00000317610 TNFRSF25Q93038 417 aa21.65■■□□□ 1.06
RTN4-201ENST00000317610 ZSWIM4Q9H7M6 989 aa21.65■■□□□ 1.06
RTN4-201ENST00000317610 MYO1AQ9UBC5 1043 aa21.65■■□□□ 1.06
RTN4-201ENST00000317610 PUF60Q9UHX1 559 aaKnown RBP21.65■■□□□ 1.06
RTN4-201ENST00000317610 DLEC1Q9Y238 1755 aa21.65■■□□□ 1.06
RTN4-201ENST00000317610 SLC20A2Q08357 652 aa21.64■■□□□ 1.06
RTN4-201ENST00000317610 HDXQ7Z353 690 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms