RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 GYPCP04921 128 aa18.48■□□□□ 0.55
CACFD1-202ENST00000316948 TTC31Q49AM3 519 aaPredicted RBP18.48■□□□□ 0.55
CACFD1-202ENST00000316948 FILIP1LQ4L180 1135 aa18.48■□□□□ 0.55
CACFD1-202ENST00000316948 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
CACFD1-202ENST00000316948 GDAP1L1Q96MZ0 367 aa18.48■□□□□ 0.55
CACFD1-202ENST00000316948 GBP3Q9H0R5 595 aa18.48■□□□□ 0.55
CACFD1-202ENST00000316948 IFIT3O14879 490 aaKnown RBP18.47■□□□□ 0.55
CACFD1-202ENST00000316948 MMP1P03956 469 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 PDE6AP16499 860 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 MAGEA9P43362 315 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 GTF2A1P52655 376 aaPredicted RBP18.47■□□□□ 0.55
CACFD1-202ENST00000316948 PIP4K2BP78356 416 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 CTDSPL2Q05D32 466 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 TRIM28Q13263 835 aaKnown RBP18.47■□□□□ 0.55
CACFD1-202ENST00000316948 ELOA2Q8IYF1 753 aaPredicted RBP18.47■□□□□ 0.55
CACFD1-202ENST00000316948 SLF1Q9BQI6 1058 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 PLA2G12BQ9BX93 195 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 HELBQ8NG08 1087 aaPredicted RBP18.47■□□□□ 0.55
CACFD1-202ENST00000316948 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 TTF2Q9UNY4 1162 aaKnown RBP18.47■□□□□ 0.55
CACFD1-202ENST00000316948 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 IL2RBP14784 551 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 ERVK-24P63145 666 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 IRX3P78415 501 aaPredicted RBP18.47■□□□□ 0.55
CACFD1-202ENST00000316948 WHAMMP3Q1A5X7 153 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 AIDAQ96BJ3 306 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
CACFD1-202ENST00000316948 RNF40O75150 1001 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 TUBB2AQ13885 445 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 NKX1-1Q15270 411 aaPredicted RBP18.46■□□□□ 0.55
CACFD1-202ENST00000316948 CNGA4Q8IV77 575 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 STAMQ92783 540 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 EPSTI1Q96J88 318 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 TMEM87BQ96K49 555 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 ZKSCAN3Q9BRR0 538 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 TUBB2BQ9BVA1 445 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 ACBD3Q9H3P7 528 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 CABP5Q9NP86 173 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 TOMM22Q9NS69 142 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 ZSWIM5Q9P217 1185 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 MYO6Q9UM54 1294 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 RPS6KA5O75582 802 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 FMNL1O95466 1100 aaPredicted RBP18.46■□□□□ 0.55
CACFD1-202ENST00000316948 UBE3CQ15386 1083 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 RILPL1Q5EBL4 403 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 RRP12Q5JTH9 1297 aaKnown RBP18.46■□□□□ 0.55
CACFD1-202ENST00000316948 KANK3Q6NY19 840 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 NUP88Q99567 741 aaPredicted RBP18.46■□□□□ 0.55
CACFD1-202ENST00000316948 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 TRIM10Q9UDY6 481 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 MKRN1Q9UHC7 482 aaKnown RBP18.46■□□□□ 0.55
CACFD1-202ENST00000316948 TACC3Q9Y6A5 838 aa18.46■□□□□ 0.55
CACFD1-202ENST00000316948 A0A087X0B3 334 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 RNF225M0QZC1 329 aaPredicted RBP18.45■□□□□ 0.54
CACFD1-202ENST00000316948 ENC1O14682 589 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 PBX1P40424 430 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 ICE2Q659A1 982 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 STRBPQ96SI9 672 aaKnown RBP18.45■□□□□ 0.54
CACFD1-202ENST00000316948 VPS16Q9H269 839 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 GUCA1BQ9UMX6 200 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 ECM29Q5VYK3 1845 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 ANKRD18BA2A2Z9 1011 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 SNAP23O00161 211 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 TTF1Q15361 905 aaPredicted RBP18.45■□□□□ 0.54
CACFD1-202ENST00000316948 VGLL2Q8N8G2 317 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 RIN2Q8WYP3 895 aaPredicted RBP18.45■□□□□ 0.54
CACFD1-202ENST00000316948 SRPRBQ9Y5M8 271 aaKnown RBP18.45■□□□□ 0.54
CACFD1-202ENST00000316948 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
CACFD1-202ENST00000316948 N4BP3O15049 544 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 ARHGAP25P42331 645 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 HSPA2P54652 639 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 NLRP10Q86W26 655 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 CCDC148Q8NFR7 591 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 EPB41L4AQ9HCS5 686 aaPredicted RBP18.44■□□□□ 0.54
CACFD1-202ENST00000316948 HDAC6Q9UBN7 1215 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 TBC1D2BQ9UPU7 963 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 ZMYND10O75800 440 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 PDE8BO95263 885 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 CTSWP56202 376 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 TUBB4BP68371 445 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 CUL4BQ13620 913 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 CTR9Q6PD62 1173 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 TRIM22Q8IYM9 498 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 MSL3Q8N5Y2 521 aaKnown RBP18.44■□□□□ 0.54
CACFD1-202ENST00000316948 WASF1Q92558 559 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 CTAGE1Q96RT6 745 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 MED4Q9NPJ6 270 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 CTNND2Q9UQB3 1225 aa18.44■□□□□ 0.54
CACFD1-202ENST00000316948 TCRBV5S4A2TA0A5A2 114 aa18.43■□□□□ 0.54
CACFD1-202ENST00000316948 GIGYF2Q6Y7W6 1299 aaKnown RBP18.43■□□□□ 0.54
CACFD1-202ENST00000316948 SGMS1Q86VZ5 419 aa18.43■□□□□ 0.54
CACFD1-202ENST00000316948 TMTC1Q8IUR5 882 aa18.43■□□□□ 0.54
CACFD1-202ENST00000316948 SPATA20Q8TB22 786 aa18.43■□□□□ 0.54
CACFD1-202ENST00000316948 AFAP1L1Q8TED9 768 aa18.43■□□□□ 0.54
CACFD1-202ENST00000316948 JRKLQ9Y4A0 524 aa18.43■□□□□ 0.54
CACFD1-202ENST00000316948 FAM205CA6NFA0 338 aa18.43■□□□□ 0.54
CACFD1-202ENST00000316948 IRS4O14654 1257 aaPredicted RBP18.43■□□□□ 0.54
CACFD1-202ENST00000316948 CDKAL1Q5VV42 579 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms