RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 FMNL1O95466 1100 aaPredicted RBP18.31■□□□□ 0.52
CALR-201ENST00000316448 AKR1B1P15121 316 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 KRT85P78386 507 aa18.31■□□□□ 0.52
CALR-201ENST00000316448 ELP1O95163 1332 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 SIPA1L1O43166 1804 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 CLRN2A0PK11 232 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 FAM196BA6NMK8 535 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
CALR-201ENST00000316448 CDKL5O76039 1030 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 DDAH1O94760 285 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 FBXO18Q8NFZ0 1043 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 ALG1Q9BT22 464 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 ZNF287Q9HBT7 754 aa18.3■□□□□ 0.52
CALR-201ENST00000316448 NOVP48745 357 aa18.29■□□□□ 0.52
CALR-201ENST00000316448 NT5C2P49902 561 aa18.29■□□□□ 0.52
CALR-201ENST00000316448 SSRP1Q08945 709 aaKnown RBP18.29■□□□□ 0.52
CALR-201ENST00000316448 DLGAP5Q15398 846 aa18.29■□□□□ 0.52
CALR-201ENST00000316448 CPLX2Q6PUV4 134 aaKnown RBP18.29■□□□□ 0.52
CALR-201ENST00000316448 CEP95Q96GE4 821 aa18.29■□□□□ 0.52
CALR-201ENST00000316448 ZBED3Q96IU2 234 aaPredicted RBP18.29■□□□□ 0.52
CALR-201ENST00000316448 ZSCAN16Q9H4T2 348 aaPredicted RBP18.29■□□□□ 0.52
CALR-201ENST00000316448 TFIP11Q9UBB9 837 aaKnown RBP18.29■□□□□ 0.52
CALR-201ENST00000316448 ZNF70Q9UC06 446 aaPredicted RBP18.29■□□□□ 0.52
CALR-201ENST00000316448 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
CALR-201ENST00000316448 RASGRP2Q7LDG7 609 aa18.29■□□□□ 0.52
CALR-201ENST00000316448 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
CALR-201ENST00000316448 SHISA4Q96DD7 197 aa18.29■□□□□ 0.52
CALR-201ENST00000316448 TAOK2Q9UL54 1235 aa18.29■□□□□ 0.52
CALR-201ENST00000316448 IGKV6D-41A0A0C4DH26 115 aa18.28■□□□□ 0.52
CALR-201ENST00000316448 SRBD1Q8N5C6 995 aaKnown RBP18.28■□□□□ 0.52
CALR-201ENST00000316448 PNMA1Q8ND90 353 aa18.28■□□□□ 0.52
CALR-201ENST00000316448 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
CALR-201ENST00000316448 EHD4Q9H223 541 aa18.28■□□□□ 0.52
CALR-201ENST00000316448 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
CALR-201ENST00000316448 HDAC9Q9UKV0 1011 aa18.28■□□□□ 0.52
CALR-201ENST00000316448 STK36Q9NRP7 1315 aa18.28■□□□□ 0.52
CALR-201ENST00000316448 CCDC196A0A1B0GTZ2 297 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 hCG_1642624A0A1W2PR95 340 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 KIF28PB7ZC32 967 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 TCP10L2B9ZVM9 353 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 FZD9O00144 591 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 ENTPD3O75355 529 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 EGFRP00533 1210 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 HLA-DOAP06340 250 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 SLC35G1Q2M3R5 365 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 TMTC3Q6ZXV5 915 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 STAG2Q8N3U4 1231 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 OGFOD1Q8N543 542 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 MTMR14Q8NCE2 650 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 SWAP70Q9UH65 585 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 STX8Q9UNK0 236 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 ARFGEF1Q9Y6D6 1849 aa18.27■□□□□ 0.52
CALR-201ENST00000316448 CALM1P0DP23 149 aa18.27■□□□□ 0.51
CALR-201ENST00000316448 CALM2P0DP24 149 aa18.27■□□□□ 0.51
CALR-201ENST00000316448 CALM3P0DP25 149 aa18.27■□□□□ 0.51
CALR-201ENST00000316448 PKN1Q16512 942 aa18.27■□□□□ 0.51
CALR-201ENST00000316448 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.51
CALR-201ENST00000316448 CCDC178Q5BJE1 867 aa18.27■□□□□ 0.51
CALR-201ENST00000316448 KRT40Q6A162 431 aa18.27■□□□□ 0.51
CALR-201ENST00000316448 ZSCAN29Q8IWY8 852 aaPredicted RBP18.27■□□□□ 0.51
CALR-201ENST00000316448 DHX36Q9H2U1 1008 aaKnown RBP18.27■□□□□ 0.51
CALR-201ENST00000316448 CNTNAP1P78357 1384 aa18.27■□□□□ 0.51
CALR-201ENST00000316448 TNIP1Q15025 636 aa18.26■□□□□ 0.51
CALR-201ENST00000316448 PPP2R5BQ15173 497 aa18.26■□□□□ 0.51
CALR-201ENST00000316448 NBPF9Q3BBW0 867 aa18.26■□□□□ 0.51
CALR-201ENST00000316448 RGS22Q8NE09 1264 aa18.26■□□□□ 0.51
CALR-201ENST00000316448 SCAND2PQ9GZW5 306 aaPredicted RBP18.26■□□□□ 0.51
CALR-201ENST00000316448 PI4KBQ9UBF8 816 aa18.26■□□□□ 0.51
CALR-201ENST00000316448 VEGFAP15692 232 aaPredicted RBP18.25■□□□□ 0.51
CALR-201ENST00000316448 RRP1BQ14684 758 aaKnown RBP18.25■□□□□ 0.51
CALR-201ENST00000316448 METTL16Q86W50 562 aaKnown RBP18.25■□□□□ 0.51
CALR-201ENST00000316448 CDAN1Q8IWY9 1227 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 RBM28Q9NW13 759 aaKnown RBP18.25■□□□□ 0.51
CALR-201ENST00000316448 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 V9GY48 417 aaPredicted RBP18.25■□□□□ 0.51
CALR-201ENST00000316448 PLIN4Q96Q06 1357 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 WNT10BO00744 389 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 JAG1P78504 1218 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 GRM4Q14833 912 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 LRSAM1Q6UWE0 723 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 PANK2Q9BZ23 570 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 FTOQ9C0B1 505 aaKnown RBP eCLIP18.25■□□□□ 0.511e-10■■■■□ 21.5
CALR-201ENST00000316448 MAD2L2Q9UI95 211 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 SCAF8Q9UPN6 1271 aaKnown RBP18.25■□□□□ 0.51
CALR-201ENST00000316448 CNTNAP5Q8WYK1 1306 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 ZNF541Q9H0D2 1346 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 ATRNL1Q5VV63 1379 aa18.25■□□□□ 0.51
CALR-201ENST00000316448 SYCE3A1L190 88 aa18.24■□□□□ 0.51
CALR-201ENST00000316448 PRPF3O43395 683 aaKnown RBP18.24■□□□□ 0.51
CALR-201ENST00000316448 GMPSP49915 693 aaPredicted RBP18.24■□□□□ 0.51
CALR-201ENST00000316448 EIF6P56537 245 aaKnown RBP18.24■□□□□ 0.51
CALR-201ENST00000316448 ZNF280AP59817 542 aaPredicted RBP18.24■□□□□ 0.51
CALR-201ENST00000316448 KIF23Q02241 960 aaPredicted RBP18.24■□□□□ 0.51
CALR-201ENST00000316448 FOXP4Q8IVH2 680 aaPredicted RBP18.24■□□□□ 0.51
CALR-201ENST00000316448 CTCFLQ8NI51 663 aaPredicted RBP18.24■□□□□ 0.51
CALR-201ENST00000316448 SYT17Q9BSW7 474 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms