RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SDCCAG8Q86SQ7 713 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-201ENST00000316433 EXOC8Q8IYI6 725 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 FAM177A1Q8N128 213 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-201ENST00000316433 ALS2CR12Q96Q35 445 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 YIPF3Q9GZM5 350 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 GBP3Q9H0R5 595 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 KAT14Q9H8E8 782 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 TNS3Q68CZ2 1445 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 SURF6O75683 361 aaKnown RBP7.49□□□□□ -1.21
ZNF540-201ENST00000316433 SMNDC1O75940 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
ZNF540-201ENST00000316433 LARGE1O95461 756 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 SFPQP23246 707 aaKnown RBP eCLIP7.49□□□□□ -1.21
ZNF540-201ENST00000316433 MAGEA10P43363 369 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-201ENST00000316433 PTH1RQ03431 593 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 FAM160A1Q05DH4 1040 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 E2F5Q15329 346 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 LRRC23Q53EV4 343 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-201ENST00000316433 BLOC1S2Q6QNY1 142 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 PARP9Q8IXQ6 854 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 ANKZF1Q9H8Y5 726 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 SLC40A1Q9NP59 571 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 ANO10Q9NW15 660 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 CHMP3Q9Y3E7 222 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 GOLGA6L9A6NEM1 432 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 FOXO3O43524 673 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 HOXA7P31268 230 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 AARSP49588 968 aaKnown RBP eCLIP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 TRIM28Q13263 835 aaKnown RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ARMCX5Q6P1M9 558 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 FAM228AQ86W67 206 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 IGSF22Q8N9C0 903 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 MSANTD4Q8NCY6 345 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 DACT1Q9NYF0 836 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 TUBE1Q9UJT0 475 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 RNF8O76064 485 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 SYF2O95926 243 aaKnown RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 FERP16591 822 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 NKX1-1Q15270 411 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 KIF4BQ2VIQ3 1234 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 NT5DC1Q5TFE4 455 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ADALQ6DHV7 355 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 BZW1Q7L1Q6 419 aaKnown RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 YTHDF3Q7Z739 585 aaKnown RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 RBM41Q96IZ5 413 aaKnown RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 SCLT1Q96NL6 688 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 TRIM7Q9C029 511 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 TRIM4Q9C037 500 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 PAPOLBQ9NRJ5 636 aaKnown RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 CORO1CQ9ULV4 474 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 TRPC6Q9Y210 931 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 SAMM50Q9Y512 469 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 NUTM2FA1L443 756 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 NEURL1BA8MQ27 555 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 EIF3HO15372 352 aaKnown RBP eCLIP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 PPP6R2O75170 966 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ATP6V1G1O75348 118 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ZFYP08048 801 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 NBPF7P0C2Y1 421 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ZNF24P17028 368 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ZMYM1Q5SVZ6 1142 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 MICALCLQ6ZW33 695 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 NBPF15Q8N660 670 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ARL10Q8N8L6 244 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 TRIM58Q8NG06 486 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 PGBD1Q96JS3 809 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 JAKMIP1Q96N16 626 aaKnown RBP7.48□□□□□ -1.21
ZNF540-201ENST00000316433 PNKPQ96T60 521 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 VIPAS39Q9H9C1 493 aa7.48□□□□□ -1.21
ZNF540-201ENST00000316433 ATAD5Q96QE3 1844 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 LRRIQ3A6PVS8 624 aaPredicted RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 BECN2A8MW95 431 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 SCNN1BP51168 640 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 CHMP4BP1P59074 171 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 G3BP1Q13283 466 aaKnown RBP eCLIP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 NMIQ13287 307 aaPredicted RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 SFMBT2Q5VUG0 894 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 MTHFD1LQ6UB35 978 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 DHX40Q8IX18 779 aaKnown RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 CCDC13Q8IYE1 715 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 KBTBD3Q8NAB2 608 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 FAM76AQ8TAV0 307 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 MIPOL1Q8TD10 442 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 AGAP3Q96P47 875 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 SPAG5Q96R06 1193 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 HPSEQ9Y251 543 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 ITGB4P16144 1822 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 FBLN1P23142 703 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 PPFIA1Q13136 1202 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 LARP1BQ659C4 914 aaKnown RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 PRPF40BQ6NWY9 871 aaKnown RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 CYB5D1Q6P9G0 228 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 FMR1NBQ8N0W7 255 aaPredicted RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 NSUN7Q8NE18 718 aaKnown RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 KCNG4Q8TDN1 519 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 GORASP1Q9BQQ3 440 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 PHACTR1Q9C0D0 580 aa7.47□□□□□ -1.21
ZNF540-201ENST00000316433 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 DNAAF2Q9NVR5 837 aaKnown RBP7.47□□□□□ -1.21
ZNF540-201ENST00000316433 MIS18AQ9NYP9 233 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms