RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 AKR1B10O60218 316 aa15.14■□□□□ 0.01
PCDHB9-201ENST00000316105 GOLGA8HP0CJ92 632 aa15.14■□□□□ 0.01
PCDHB9-201ENST00000316105 GTF2IP78347 998 aa15.14■□□□□ 0.01
PCDHB9-201ENST00000316105 PAK1Q13153 545 aa15.14■□□□□ 0.01
PCDHB9-201ENST00000316105 NONOQ15233 471 aaKnown RBP eCLIP15.14■□□□□ 0.01
PCDHB9-201ENST00000316105 AXDND1Q5T1B0 1012 aaPredicted RBP15.14■□□□□ 0.01
PCDHB9-201ENST00000316105 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
PCDHB9-201ENST00000316105 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
PCDHB9-201ENST00000316105 TCERG1LQ5VWI1 586 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 SEPT11Q9NVA2 429 aaKnown RBP15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 PCDHB6Q9Y5E3 794 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 PARP3Q9Y6F1 533 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 RGPD8O14715 1765 aaPredicted RBP15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 TXKP42681 527 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 MECOMQ03112 1051 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 GRAMD1CQ8IYS0 662 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 ZNF34Q8IZ26 560 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 SYMPKQ92797 1274 aaKnown RBP15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 SRRTQ9BXP5 876 aaKnown RBP15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 BCL2L12Q9HB09 334 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 MINPP1Q9UNW1 487 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 ARHGAP6O43182 974 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 FAM193AP78312 1265 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 SPECC1LQ69YQ0 1117 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 GBP3Q9H0R5 595 aa15.13■□□□□ 0.01
PCDHB9-201ENST00000316105 POLR3GO15318 223 aaPredicted RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 PPP1R12BO60237 982 aaPredicted RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 CTDNEP1O95476 244 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 ADKP55263 362 aaKnown RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 SYCP1Q15431 976 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 FMR1NBQ8N0W7 255 aaPredicted RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 ERO1AQ96HE7 468 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 LUC7L2Q9Y383 392 aaKnown RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 BICDL2A1A5D9 508 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 CDC25BP30305 580 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 CYLC1P35663 651 aaPredicted RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 PDE4DQ08499 809 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 BMS1Q14692 1282 aaKnown RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 ALX1Q15699 326 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 LONRF3Q496Y0 759 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 CCDC94Q9BW85 323 aaPredicted RBP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 MMRN2Q9H8L6 949 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 TAB2Q9NYJ8 693 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 BTDP43251 543 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 INF2Q27J81 1249 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 ZNF569Q5MCW4 686 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 FEZ1Q99689 392 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 ERICH4A6NGS2 130 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 KIF28PB7ZC32 967 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 PTPN21Q16825 1174 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 KRT25Q7Z3Z0 450 aa15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.12■□□□□ 0.01
PCDHB9-201ENST00000316105 USP17L8P0C7I0 530 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 PRDX5P30044 214 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 ANTXR2P58335 489 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 TAF3Q5VWG9 929 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 KLRF2D3W0D1 207 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 DIXDC1Q155Q3 683 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 DPP8Q6V1X1 898 aaPredicted RBP15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 XDHP47989 1333 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 MYO1BO43795 1136 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 ST3GAL1Q11201 340 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 TRIML1Q8N9V2 468 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 JADE2Q9NQC1 790 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 FMN2Q9NZ56 1722 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 UBN2Q6ZU65 1347 aa15.11■□□□□ 0.01
PCDHB9-201ENST00000316105 PLEKHA8P1O95397 391 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 ERMNQ8TAM6 284 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 GUCA1BQ9UMX6 200 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 CTAGE9A4FU28 777 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 SMCO2A6NFE2 343 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 MRPL12P52815 198 aaKnown RBP15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 ARID5BQ14865 1188 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 TBC1D9BQ66K14 1250 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 SV2BQ7L1I2 683 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 KRT222Q8N1A0 295 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 RASGRP4Q8TDF6 673 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 NELFBQ8WX92 580 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 TAF4BQ92750 862 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 LEMD3Q9Y2U8 911 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 IKBKBO14920 756 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 ATP2B4P23634 1241 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 REXO1Q8N1G1 1221 aaKnown RBP15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 ELF2Q15723 593 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 SGMS1Q86VZ5 419 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 CSGALNACT2Q8N6G5 542 aa15.1■□□□□ 0.01
PCDHB9-201ENST00000316105 ATP1A3P13637 1013 aa15.09■□□□□ 0.01
PCDHB9-201ENST00000316105 FDPSP14324 419 aaKnown RBP15.09■□□□□ 0.01
PCDHB9-201ENST00000316105 DYNLL2Q96FJ2 89 aa15.09■□□□□ 0.01
PCDHB9-201ENST00000316105 NWD1Q149M9 1564 aa15.09■□□□□ 0.01
PCDHB9-201ENST00000316105 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
PCDHB9-201ENST00000316105 RPS6KA4O75676 772 aa15.09■□□□□ 0.01
PCDHB9-201ENST00000316105 TBC1D8BQ0IIM8 1120 aa15.09■□□□□ 0.01
PCDHB9-201ENST00000316105 BRIP1Q9BX63 1249 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms