RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 AXDND1Q5T1B0 1012 aaPredicted RBP5.72□□□□□ -1.49
SMCO3-201ENST00000316048 LCE2AQ5TA79 106 aaPredicted RBP5.72□□□□□ -1.49
SMCO3-201ENST00000316048 ZNF385CQ66K41 422 aaPredicted RBP5.72□□□□□ -1.49
SMCO3-201ENST00000316048 DCAF15Q66K64 600 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 DYMQ7RTS9 669 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.72□□□□□ -1.49
SMCO3-201ENST00000316048 DTWD1Q8N5C7 304 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 PLVAPQ9BX97 442 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 PCDH12Q9NPG4 1184 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 CBFA2T2O43439 604 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 ALX3O95076 343 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 TIAF1O95411 115 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 L1CAMP32004 1257 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 SOX4Q06945 474 aaPredicted RBP5.72□□□□□ -1.49
SMCO3-201ENST00000316048 LINC00114Q6XXX2 140 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 RNF208Q9H0X6 261 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 SPC25Q9HBM1 224 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 LRRC4BQ9NT99 713 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 SUCOQ9UBS9 1254 aaKnown RBP5.72□□□□□ -1.49
SMCO3-201ENST00000316048 BAZ1AQ9NRL2 1556 aaPredicted RBP5.72□□□□□ -1.49
SMCO3-201ENST00000316048 TBX1O43435 398 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 RNGTTO60942 597 aaKnown RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 PMS1P54277 932 aaKnown RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 HNRNPUQ00839 825 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 AMPD3Q01432 767 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 DALRD3Q5D0E6 543 aaKnown RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 SLC6A19Q695T7 634 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 RPUSD2Q8IZ73 545 aaKnown RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 C2CD4AQ8NCU7 369 aaPredicted RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 NEDD1Q8NHV4 660 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 ZNF507Q8TCN5 953 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 EXOC2Q96KP1 924 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 FGD4Q96M96 766 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 HAUS7Q99871 368 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 FAM126AQ9BYI3 521 aaPredicted RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 ATXN3LQ9H3M9 355 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 SYNGAP1Q96PV0 1343 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 MROH2BQ7Z745 1585 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 SV2CQ496J9 727 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 C12orf50Q8NA57 414 aaPredicted RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 SMG8Q8ND04 991 aaKnown RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 PPP1R13LQ8WUF5 828 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 SLKQ9H2G2 1235 aaPredicted RBP5.71□□□□□ -1.5
SMCO3-201ENST00000316048 SUGCTQ9HAC7 445 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 LGR6Q9HBX8 967 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 ARHGEF4Q9NR80 690 aa5.71□□□□□ -1.5
SMCO3-201ENST00000316048 A0A1W2PQU0 124 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 MEGF11A6BM72 1044 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 GBP1P32455 592 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 GRIA2P42262 883 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 ASPAP45381 313 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 PREPP48147 710 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 MASP1P48740 699 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 RAC1P63000 192 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 IGBP1P78318 339 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 GRIK4Q16099 956 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 ARMCX6Q7L4S7 300 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 SVOPQ8N4V2 548 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 ZBTB38Q8NAP3 1195 aaPredicted RBP5.7□□□□□ -1.5
SMCO3-201ENST00000316048 CYB5D2Q8WUJ1 264 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 PPP1R14AQ96A00 147 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 CCDC74BQ96LY2 380 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 CYP4F12Q9HCS2 524 aa5.7□□□□□ -1.5
SMCO3-201ENST00000316048 NOP58Q9Y2X3 529 aaKnown RBP5.7□□□□□ -1.5
SMCO3-201ENST00000316048 CLEC3AO75596 197 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 RAB6AP20340 208 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 FAM209AQ5JX71 171 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 CDC37L1Q7L3B6 337 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 ZNF513Q8N8E2 541 aaPredicted RBP5.69□□□□□ -1.5
SMCO3-201ENST00000316048 RIN3Q8TB24 985 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 ZNF669Q96BR6 464 aaPredicted RBP5.69□□□□□ -1.5
SMCO3-201ENST00000316048 GSX1Q9H4S2 264 aaPredicted RBP5.69□□□□□ -1.5
SMCO3-201ENST00000316048 PIDD1Q9HB75 910 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 KRBA1A5PL33 1030 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 IRS4O14654 1257 aaPredicted RBP5.69□□□□□ -1.5
SMCO3-201ENST00000316048 SHOXO15266 292 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 DYNC1LI2O43237 492 aaPredicted RBP5.69□□□□□ -1.5
SMCO3-201ENST00000316048 CST3P01034 146 aaPredicted RBP5.69□□□□□ -1.5
SMCO3-201ENST00000316048 TCEA2Q15560 299 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 TMEM67Q5HYA8 995 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 FDX2Q6P4F2 183 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 SMYD4Q8IYR2 804 aaPredicted RBP5.69□□□□□ -1.5
SMCO3-201ENST00000316048 ZSWIM2Q8NEG5 633 aa5.69□□□□□ -1.5
SMCO3-201ENST00000316048 SSU72Q9NP77 194 aaKnown RBP5.69□□□□□ -1.5
SMCO3-201ENST00000316048 COL17A1Q9UMD9 1497 aaPredicted RBP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 ITGAVP06756 1048 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 CCNFP41002 786 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 PPP2R2AP63151 447 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 DHX37Q8IY37 1157 aaKnown RBP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 ADCY4Q8NFM4 1077 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 KLHL25Q9H0H3 589 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 KLHL42Q9P2K6 505 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 PRKAB1Q9Y478 270 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 BICRAQ9NZM4 1560 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 F8W735 103 aaPredicted RBP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 IBSPP21815 317 aaPredicted RBP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 ANAPC15P60006 121 aa5.68□□□□□ -1.5
SMCO3-201ENST00000316048 HEATR6Q6AI08 1181 aaKnown RBP5.68□□□□□ -1.5
SMCO3-201ENST00000316048 CCDC144CPQ8IYA2 1237 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms