RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 DZIP1Q86YF9 867 aaKnown RBP17.09■□□□□ 0.33
CHFR-202ENST00000315585 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
CHFR-202ENST00000315585 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
CHFR-202ENST00000315585 CCDC88AQ3V6T2 1871 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.33
CHFR-202ENST00000315585 UFL1O94874 794 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 PDE6BP35913 854 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 FANCCQ00597 558 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 NCAPHQ15003 741 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 CERS3Q8IU89 383 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.33
CHFR-202ENST00000315585 KIF18AQ8NI77 898 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 CCDC94Q9BW85 323 aaPredicted RBP17.08■□□□□ 0.33
CHFR-202ENST00000315585 INCENPQ9NQS7 918 aa17.08■□□□□ 0.33
CHFR-202ENST00000315585 SERPINC1P01008 464 aa17.08■□□□□ 0.32
CHFR-202ENST00000315585 LDHBP07195 334 aaKnown RBP17.08■□□□□ 0.32
CHFR-202ENST00000315585 ALDH1B1P30837 517 aa17.08■□□□□ 0.32
CHFR-202ENST00000315585 TXNRD3Q86VQ6 643 aa17.08■□□□□ 0.32
CHFR-202ENST00000315585 SP8Q8IXZ3 490 aa17.08■□□□□ 0.32
CHFR-202ENST00000315585 MLKLQ8NB16 471 aa17.08■□□□□ 0.32
CHFR-202ENST00000315585 ZSCAN10Q96SZ4 725 aaPredicted RBP17.08■□□□□ 0.32
CHFR-202ENST00000315585 TMX4Q9H1E5 349 aaPredicted RBP17.08■□□□□ 0.32
CHFR-202ENST00000315585 SRPRBQ9Y5M8 271 aaKnown RBP17.08■□□□□ 0.32
CHFR-202ENST00000315585 TNKSO95271 1327 aa17.08■□□□□ 0.32
CHFR-202ENST00000315585 LDHCP07864 332 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 NPR1P16066 1061 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 UBASH3AP57075 661 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 NYAP1Q6ZVC0 841 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 TMC6Q7Z403 805 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 NKX2-3Q8TAU0 364 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 ATP8A2Q9NTI2 1148 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 SEC23AQ15436 765 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 IFIT1BQ5T764 474 aaKnown RBP17.07■□□□□ 0.32
CHFR-202ENST00000315585 ZKSCAN3Q9BRR0 538 aa17.07■□□□□ 0.32
CHFR-202ENST00000315585 A0A087WWV3 80 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 PPEF1O14829 653 aaPredicted RBP17.06■□□□□ 0.32
CHFR-202ENST00000315585 PRPF3O43395 683 aaKnown RBP17.06■□□□□ 0.32
CHFR-202ENST00000315585 DDAH1O94760 285 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 LONRF3Q496Y0 759 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 SDR42E1Q8WUS8 393 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 FGRP09769 529 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
CHFR-202ENST00000315585 PNOCQ13519 176 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 POSTNQ15063 836 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 PDCL2Q8N4E4 241 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 ANKRD7Q92527 254 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
CHFR-202ENST00000315585 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
CHFR-202ENST00000315585 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 BAG3O95817 575 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 PRDX5P30044 214 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 KRT2P35908 639 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
CHFR-202ENST00000315585 SMARCE1Q969G3 411 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 PYM1Q9BRP8 204 aaKnown RBP17.05■□□□□ 0.32
CHFR-202ENST00000315585 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
CHFR-202ENST00000315585 TRIM75PA6NK02 468 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 IL1R1P14778 569 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 CFAP100Q494V2 611 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 METTL16Q86W50 562 aaKnown RBP17.05■□□□□ 0.32
CHFR-202ENST00000315585 STK11IPQ8N1F8 1099 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 TACC3Q9Y6A5 838 aa17.05■□□□□ 0.32
CHFR-202ENST00000315585 GUCY1A2P33402 732 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
CHFR-202ENST00000315585 SLF2Q8IX21 1173 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 ZNF384Q8TF68 577 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 TBC1D22AQ8WUA7 517 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 AATFQ9NY61 560 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHFR-202ENST00000315585 MMP10P09238 476 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 SRGNP10124 158 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 TBC1D16Q8TBP0 767 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 ZNF592Q92610 1267 aa17.04■□□□□ 0.32
CHFR-202ENST00000315585 ARPP21Q9UBL0 812 aaPredicted RBP17.04■□□□□ 0.32
CHFR-202ENST00000315585 LRRC37AA6NMS7 1700 aa17.03■□□□□ 0.32
CHFR-202ENST00000315585 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
CHFR-202ENST00000315585 MDM2Q00987 491 aaPredicted RBP17.03■□□□□ 0.32
CHFR-202ENST00000315585 ARID5BQ14865 1188 aa17.03■□□□□ 0.32
CHFR-202ENST00000315585 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
CHFR-202ENST00000315585 POLR2DO15514 142 aaKnown RBP17.02■□□□□ 0.32
CHFR-202ENST00000315585 ORC4O43929 436 aa17.02■□□□□ 0.32
CHFR-202ENST00000315585 TOP1P11387 765 aaKnown RBP17.02■□□□□ 0.32
CHFR-202ENST00000315585 FCHSD1Q86WN1 690 aa17.02■□□□□ 0.32
CHFR-202ENST00000315585 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
CHFR-202ENST00000315585 ENAHQ8N8S7 591 aaPredicted RBP17.02■□□□□ 0.32
CHFR-202ENST00000315585 ENOX1Q8TC92 643 aaKnown RBP17.02■□□□□ 0.32
CHFR-202ENST00000315585 MASTLQ96GX5 879 aa17.02■□□□□ 0.32
CHFR-202ENST00000315585 CABP5Q9NP86 173 aa17.02■□□□□ 0.32
CHFR-202ENST00000315585 CGNQ9P2M7 1197 aaKnown RBP17.02■□□□□ 0.32
CHFR-202ENST00000315585 ERCC5P28715 1186 aaPredicted RBP17.02■□□□□ 0.32
CHFR-202ENST00000315585 PDE4BQ07343 736 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms