RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 ZSCAN16Q9H4T2 348 aaPredicted RBP29.03■■■□□ 2.24
CDPF1-201ENST00000314567 ZC3H4Q9UPT8 1303 aaKnown RBP29.03■■■□□ 2.24
CDPF1-201ENST00000314567 TSPY2A6NKD2 308 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 ZBTB43O43298 467 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 CDKL5O76039 1030 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 SHMT1P34896 483 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 SHROOM1Q2M3G4 852 aaPredicted RBP29.02■■■□□ 2.24
CDPF1-201ENST00000314567 USP48Q86UV5 1035 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 RAB11FIP4Q86YS3 637 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 CRACR2BQ8N4Y2 399 aaPredicted RBP29.02■■■□□ 2.24
CDPF1-201ENST00000314567 GPT2Q8TD30 523 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 CCDC69A6NI79 296 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 RCAN1P53805 252 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 PRAMEF18Q5VWM3 479 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 CPLX2Q6PUV4 134 aaKnown RBP29.02■■■□□ 2.24
CDPF1-201ENST00000314567 FAM83AQ86UY5 434 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 PGAP2Q9UHJ9 254 aa29.02■■■□□ 2.24
CDPF1-201ENST00000314567 MYH15Q9Y2K3 1946 aa29.01■■■□□ 2.23
CDPF1-201ENST00000314567 POTECB2RU33 542 aa29.01■■■□□ 2.23
CDPF1-201ENST00000314567 KRT85P78386 507 aa29.01■■■□□ 2.23
CDPF1-201ENST00000314567 WTAPQ15007 396 aa29.01■■■□□ 2.23
CDPF1-201ENST00000314567 ZNF444Q8N0Y2 327 aaPredicted RBP29.01■■■□□ 2.23
CDPF1-201ENST00000314567 DNM1Q05193 864 aaKnown RBP29■■■□□ 2.23
CDPF1-201ENST00000314567 DLK2Q6UY11 383 aa29■■■□□ 2.23
CDPF1-201ENST00000314567 SYNE3Q6ZMZ3 975 aa29■■■□□ 2.23
CDPF1-201ENST00000314567 UBAC1Q9BSL1 405 aa29■■■□□ 2.23
CDPF1-201ENST00000314567 EHD4Q9H223 541 aa29■■■□□ 2.23
CDPF1-201ENST00000314567 SLC12A7Q9Y666 1083 aa29■■■□□ 2.23
CDPF1-201ENST00000314567 COL2A1P02458 1487 aaPredicted RBP29■■■□□ 2.23
CDPF1-201ENST00000314567 FERMT3Q86UX7 667 aa29■■■□□ 2.23
CDPF1-201ENST00000314567 DEFB129Q9H1M3 183 aa29■■■□□ 2.23
CDPF1-201ENST00000314567 TNKSO95271 1327 aa28.99■■■□□ 2.23
CDPF1-201ENST00000314567 EPHX2P34913 555 aa28.99■■■□□ 2.23
CDPF1-201ENST00000314567 RESTQ13127 1097 aa28.99■■■□□ 2.23
CDPF1-201ENST00000314567 MIGA2Q7L4E1 593 aa28.99■■■□□ 2.23
CDPF1-201ENST00000314567 TEPSINQ96N21 525 aa28.99■■■□□ 2.23
CDPF1-201ENST00000314567 GDPD2Q9HCC8 539 aa28.99■■■□□ 2.23
CDPF1-201ENST00000314567 IL17RBQ9NRM6 502 aa28.99■■■□□ 2.23
CDPF1-201ENST00000314567 TSPY3P0CV98 308 aa28.98■■■□□ 2.23
CDPF1-201ENST00000314567 TSPY8P0CW00 308 aa28.98■■■□□ 2.23
CDPF1-201ENST00000314567 FDPSP14324 419 aaKnown RBP28.98■■■□□ 2.23
CDPF1-201ENST00000314567 AKR1B1P15121 316 aa28.98■■■□□ 2.23
CDPF1-201ENST00000314567 ENAHQ8N8S7 591 aaPredicted RBP28.98■■■□□ 2.23
CDPF1-201ENST00000314567 ZSCAN10Q96SZ4 725 aaPredicted RBP28.98■■■□□ 2.23
CDPF1-201ENST00000314567 GOLGA8AA7E2F4 631 aa28.97■■■□□ 2.23
CDPF1-201ENST00000314567 TNNI2P48788 182 aa28.97■■■□□ 2.23
CDPF1-201ENST00000314567 RRP1BQ14684 758 aaKnown RBP28.97■■■□□ 2.23
CDPF1-201ENST00000314567 SEC23AQ15436 765 aa28.97■■■□□ 2.23
CDPF1-201ENST00000314567 L1TD1Q5T7N2 865 aaKnown RBP28.97■■■□□ 2.23
CDPF1-201ENST00000314567 CAVIN1Q6NZI2 390 aaKnown RBP28.97■■■□□ 2.23
CDPF1-201ENST00000314567 MICU3Q86XE3 530 aa28.97■■■□□ 2.23
CDPF1-201ENST00000314567 TRIM34Q9BYJ4 488 aa28.97■■■□□ 2.23
CDPF1-201ENST00000314567 ZNF287Q9HBT7 754 aa28.97■■■□□ 2.23
CDPF1-201ENST00000314567 ORC3Q9UBD5 711 aaPredicted RBP28.97■■■□□ 2.23
CDPF1-201ENST00000314567 SWAP70Q9UH65 585 aa28.97■■■□□ 2.23
CDPF1-201ENST00000314567 FSD2A1L4K1 749 aa28.96■■■□□ 2.23
CDPF1-201ENST00000314567 GOLGA6L3A6NEY3 463 aa28.96■■■□□ 2.23
CDPF1-201ENST00000314567 FIBPO43427 364 aa28.96■■■□□ 2.23
CDPF1-201ENST00000314567 UBE2HP62256 183 aa28.96■■■□□ 2.23
CDPF1-201ENST00000314567 TNFAIP1Q13829 316 aa28.96■■■□□ 2.23
CDPF1-201ENST00000314567 CLEC10AQ8IUN9 316 aa28.96■■■□□ 2.23
CDPF1-201ENST00000314567 FOXP4Q8IVH2 680 aaPredicted RBP28.96■■■□□ 2.23
CDPF1-201ENST00000314567 MYL10Q9BUA6 226 aa28.96■■■□□ 2.23
CDPF1-201ENST00000314567 ELP1O95163 1332 aa28.95■■■□□ 2.23
CDPF1-201ENST00000314567 RXRAP19793 462 aa28.95■■■□□ 2.23
CDPF1-201ENST00000314567 IQCA1Q86XH1 822 aa28.95■■■□□ 2.23
CDPF1-201ENST00000314567 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.95■■■□□ 2.23
CDPF1-201ENST00000314567 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.95■■■□□ 2.23
CDPF1-201ENST00000314567 EAPPQ56P03 285 aaPredicted RBP28.95■■■□□ 2.22
CDPF1-201ENST00000314567 METTL16Q86W50 562 aaKnown RBP28.95■■■□□ 2.22
CDPF1-201ENST00000314567 SCAND2PQ9GZW5 306 aaPredicted RBP28.95■■■□□ 2.22
CDPF1-201ENST00000314567 TAF1DQ9H5J8 278 aaPredicted RBP28.95■■■□□ 2.22
CDPF1-201ENST00000314567 SCN4AP35499 1836 aa28.94■■■□□ 2.22
CDPF1-201ENST00000314567 GDF11O95390 407 aa28.94■■■□□ 2.22
CDPF1-201ENST00000314567 NBPF12Q5TAG4 269 aaPredicted RBP28.94■■■□□ 2.22
CDPF1-201ENST00000314567 SYAP1Q96A49 352 aaPredicted RBP28.94■■■□□ 2.22
CDPF1-201ENST00000314567 WDR90Q96KV7 1748 aa28.94■■■□□ 2.22
CDPF1-201ENST00000314567 STK36Q9NRP7 1315 aa28.93■■■□□ 2.22
CDPF1-201ENST00000314567 DCAF8L1A6NGE4 600 aa28.93■■■□□ 2.22
CDPF1-201ENST00000314567 JAG1P78504 1218 aa28.93■■■□□ 2.22
CDPF1-201ENST00000314567 APOBEC3FQ8IUX4 373 aaKnown RBP28.93■■■□□ 2.22
CDPF1-201ENST00000314567 MPHOSPH10O00566 681 aaKnown RBP28.93■■■□□ 2.22
CDPF1-201ENST00000314567 PPP2R5BQ15173 497 aa28.93■■■□□ 2.22
CDPF1-201ENST00000314567 RCSD1Q6JBY9 416 aa28.93■■■□□ 2.22
CDPF1-201ENST00000314567 TATDN1Q6P1N9 297 aa28.93■■■□□ 2.22
CDPF1-201ENST00000314567 NEDD1Q8NHV4 660 aa28.93■■■□□ 2.22
CDPF1-201ENST00000314567 FZD1Q9UP38 647 aa28.93■■■□□ 2.22
CDPF1-201ENST00000314567 GADD45BO75293 160 aaPredicted RBP28.92■■■□□ 2.22
CDPF1-201ENST00000314567 POTEIP0CG38 1075 aa28.92■■■□□ 2.22
CDPF1-201ENST00000314567 POTEJP0CG39 1038 aa28.92■■■□□ 2.22
CDPF1-201ENST00000314567 CDC27P30260 824 aa28.92■■■□□ 2.22
CDPF1-201ENST00000314567 ADD1P35611 737 aaKnown RBP28.92■■■□□ 2.22
CDPF1-201ENST00000314567 ZNF445P59923 1031 aa28.92■■■□□ 2.22
CDPF1-201ENST00000314567 CERKLQ49MI3 558 aaPredicted RBP28.92■■■□□ 2.22
CDPF1-201ENST00000314567 CCDC144CPQ8IYA2 1237 aa28.92■■■□□ 2.22
CDPF1-201ENST00000314567 C8orf76Q96K31 380 aa28.92■■■□□ 2.22
CDPF1-201ENST00000314567 CCDC196A0A1B0GTZ2 297 aa28.91■■■□□ 2.22
CDPF1-201ENST00000314567 ADM5C9JUS6 153 aa28.91■■■□□ 2.22
CDPF1-201ENST00000314567 NTRK3Q16288 839 aa28.91■■■□□ 2.22
CDPF1-201ENST00000314567 ATL3Q6DD88 541 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms