RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 FGFR2P21802 821 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 HNRNPH2P55795 449 aaKnown RBP15.72■□□□□ 0.11
MKS1-201ENST00000313863 GRIN1Q05586 938 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 SPAG1Q07617 926 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 PTPN21Q16825 1174 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 ZNF827Q17R98 1081 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 CDKAL1Q5VV42 579 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 ZNF654Q8IZM8 581 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 ANKRD20A12PQ8NF67 263 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 MRPL44Q9H9J2 332 aaKnown RBP15.72■□□□□ 0.11
MKS1-201ENST00000313863 ADD3Q9UEY8 706 aaKnown RBP15.72■□□□□ 0.11
MKS1-201ENST00000313863 PBX1P40424 430 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 USP5P45974 858 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 CUL4BQ13620 913 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 RRP12Q5JTH9 1297 aaKnown RBP15.72■□□□□ 0.11
MKS1-201ENST00000313863 HDXQ7Z353 690 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 SH3RF1Q7Z6J0 888 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 TMTC1Q8IUR5 882 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 DNAJC10Q8IXB1 793 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 ARMT1Q9H993 441 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 CABP5Q9NP86 173 aa15.72■□□□□ 0.11
MKS1-201ENST00000313863 TRMT112Q9UI30 125 aaKnown RBP15.72■□□□□ 0.11
MKS1-201ENST00000313863 COL22A1Q8NFW1 1626 aaPredicted RBP15.71■□□□□ 0.11
MKS1-201ENST00000313863 SOWAHDA6NJG2 315 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 TULP2O00295 520 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 FECHP22830 423 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 GPTP24298 496 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 KRT2P35908 639 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 RBL2Q08999 1139 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 GRAMD1CQ8IYS0 662 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 MSANTD4Q8NCY6 345 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 LZTFL1Q9NQ48 299 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 RAB21Q9UL25 225 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 SLC4A4Q9Y6R1 1079 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 PLCH1Q4KWH8 1693 aa15.71■□□□□ 0.11
MKS1-201ENST00000313863 MAP2K7O14733 419 aa15.71■□□□□ 0.1
MKS1-201ENST00000313863 PIP4K2BP78356 416 aa15.71■□□□□ 0.1
MKS1-201ENST00000313863 NR5A1Q13285 461 aa15.71■□□□□ 0.1
MKS1-201ENST00000313863 WHAMMP3Q1A5X7 153 aa15.71■□□□□ 0.1
MKS1-201ENST00000313863 KIF4BQ2VIQ3 1234 aa15.71■□□□□ 0.1
MKS1-201ENST00000313863 APTXQ7Z2E3 356 aaKnown RBP15.71■□□□□ 0.1
MKS1-201ENST00000313863 ACBD3Q9H3P7 528 aa15.71■□□□□ 0.1
MKS1-201ENST00000313863 MYH13Q9UKX3 1938 aa15.71■□□□□ 0.1
MKS1-201ENST00000313863 UBE2Q2LH0YL09 131 aa15.7■□□□□ 0.1
MKS1-201ENST00000313863 RAD9BQ6WBX8 426 aa15.7■□□□□ 0.1
MKS1-201ENST00000313863 ESR2Q92731 530 aa15.7■□□□□ 0.1
MKS1-201ENST00000313863 PAGE5Q96GU1 130 aa15.7■□□□□ 0.1
MKS1-201ENST00000313863 MED15Q96RN5 788 aa15.7■□□□□ 0.1
MKS1-201ENST00000313863 INCENPQ9NQS7 918 aa15.7■□□□□ 0.1
MKS1-201ENST00000313863 RBM28Q9NW13 759 aaKnown RBP15.7■□□□□ 0.1
MKS1-201ENST00000313863 IQSEC3Q9UPP2 1182 aaPredicted RBP15.7■□□□□ 0.1
MKS1-201ENST00000313863 ITGB4P16144 1822 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 TEX33O43247 280 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 ZNF569Q5MCW4 686 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 NAPGQ99747 312 aaPredicted RBP15.69■□□□□ 0.1
MKS1-201ENST00000313863 EPC1Q9H2F5 836 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 ERVV-1B6SEH8 477 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 CALM1P0DP23 149 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 CALM2P0DP24 149 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 CALM3P0DP25 149 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 ATP2B1P20020 1258 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 DPYDQ12882 1025 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 RASGRF1Q13972 1273 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 MTF1Q14872 753 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 HLFQ16534 295 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 KLHL10Q6JEL2 608 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 CYP26C1Q6V0L0 522 aa15.69■□□□□ 0.1
MKS1-201ENST00000313863 LIMA1Q9UHB6 759 aaKnown RBP15.69■□□□□ 0.1
MKS1-201ENST00000313863 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
MKS1-201ENST00000313863 PRPF3O43395 683 aaKnown RBP15.68■□□□□ 0.1
MKS1-201ENST00000313863 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
MKS1-201ENST00000313863 IRX5P78411 483 aaPredicted RBP15.68■□□□□ 0.1
MKS1-201ENST00000313863 SYNE4Q8N205 404 aa15.68■□□□□ 0.1
MKS1-201ENST00000313863 GOLGA5Q8TBA6 731 aa15.68■□□□□ 0.1
MKS1-201ENST00000313863 PHF20Q9BVI0 1012 aa15.68■□□□□ 0.1
MKS1-201ENST00000313863 RMND1Q9NWS8 449 aa15.68■□□□□ 0.1
MKS1-201ENST00000313863 ANAPC4Q9UJX5 808 aa15.68■□□□□ 0.1
MKS1-201ENST00000313863 DLEC1Q9Y238 1755 aa15.68■□□□□ 0.1
MKS1-201ENST00000313863 CTAGE15A4D2H0 777 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 CTAGE8P0CG41 777 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 AFMP43652 599 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 PPARAQ07869 468 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 CTAGE6Q86UF2 777 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 CTAGE4Q8IX94 777 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 IQUBQ8NA54 791 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 NEK11Q8NG66 645 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 OXER1Q8TDS5 423 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 CPLX3Q8WVH0 158 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 SYMPKQ92797 1274 aaKnown RBP15.67■□□□□ 0.1
MKS1-201ENST00000313863 ZKSCAN3Q9BRR0 538 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 PPP1R3GB7ZBB8 358 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 PCP11498 1178 aaKnown RBP15.67■□□□□ 0.1
MKS1-201ENST00000313863 CASP14P31944 242 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 ST5P78524 1137 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 BEND6Q5SZJ8 279 aaPredicted RBP15.67■□□□□ 0.1
MKS1-201ENST00000313863 USP49Q70CQ1 688 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 CATIPQ7Z7H3 387 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 BCL9LQ86UU0 1499 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 LCORLQ8N3X6 602 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms