RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ATP2B2Q01814 1243 aa14.38□□□□□ -0.11
SCFD1-201ENST00000311943 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
SCFD1-201ENST00000311943 MYH8P13535 1937 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 USP17L10C9JJH3 530 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 GNAT2P19087 354 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 TBC1D10CQ8IV04 446 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 DDRGK1Q96HY6 314 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 TLR2O60603 784 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 CAPN15O75808 1086 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 EEF2P13639 858 aaKnown RBP14.37□□□□□ -0.11
SCFD1-201ENST00000311943 LRRFIP1Q32MZ4 808 aaKnown RBP14.37□□□□□ -0.11
SCFD1-201ENST00000311943 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
SCFD1-201ENST00000311943 TNS4Q8IZW8 715 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 FEZ1Q99689 392 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 MKNK2Q9HBH9 465 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 ADGRA2Q96PE1 1338 aa14.37□□□□□ -0.11
SCFD1-201ENST00000311943 SH3D19Q5HYK7 790 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 GIMAP6Q6P9H5 292 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 C17orf99Q6UX52 265 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 NUP88Q99567 741 aaPredicted RBP14.36□□□□□ -0.11
SCFD1-201ENST00000311943 MCOLN1Q9GZU1 580 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 TXNRD2Q9NNW7 524 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 AGTPBP1Q9UPW5 1226 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 ROBO3Q96MS0 1386 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 RAD21O60216 631 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 RRP12Q5JTH9 1297 aaKnown RBP14.36□□□□□ -0.11
SCFD1-201ENST00000311943 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
SCFD1-201ENST00000311943 ANKRD13CQ8N6S4 541 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
SCFD1-201ENST00000311943 ASCC2Q9H1I8 757 aaPredicted RBP14.36□□□□□ -0.11
SCFD1-201ENST00000311943 ZFYVE28Q9HCC9 887 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 SWAP70Q9UH65 585 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 LOC285556D6RIA3 1793 aa14.36□□□□□ -0.11
SCFD1-201ENST00000311943 FKTNO75072 461 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 ALDH1A1P00352 501 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 VCAM1P19320 739 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 ICA1Q05084 483 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 OTUD7BQ6GQQ9 843 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 TMEM179Q6ZVK1 233 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 CEP95Q96GE4 821 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 CFHR5Q9BXR6 569 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 AS3MTQ9HBK9 375 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 IL17RBQ9NRM6 502 aa14.35□□□□□ -0.11
SCFD1-201ENST00000311943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCFD1-201ENST00000311943 TFAP4Q01664 338 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 SP3Q02447 781 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 Q3C1V9 767 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 FASTKD5Q7L8L6 764 aaKnown RBP14.34□□□□□ -0.11
SCFD1-201ENST00000311943 AMOTL1Q8IY63 956 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 LRRC47Q8N1G4 583 aaKnown RBP14.34□□□□□ -0.11
SCFD1-201ENST00000311943 ZKSCAN3Q9BRR0 538 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 NEDD4P46934 1319 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 FBXO28Q9NVF7 368 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 MTMR7Q9Y216 660 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 TRIM17Q9Y577 477 aa14.34□□□□□ -0.11
SCFD1-201ENST00000311943 KIAA1683Q9H0B3 1180 aa14.33□□□□□ -0.12
SCFD1-201ENST00000311943 RPAP3Q9H6T3 665 aaPredicted RBP14.33□□□□□ -0.12
SCFD1-201ENST00000311943 CLIP2Q9UDT6 1046 aa14.33□□□□□ -0.12
SCFD1-201ENST00000311943 GREB1LQ9C091 1923 aaPredicted RBP14.33□□□□□ -0.12
SCFD1-201ENST00000311943 IGKV6D-41A0A0C4DH26 115 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 RANBP6O60518 1105 aaKnown RBP14.32□□□□□ -0.12
SCFD1-201ENST00000311943 MYCP01106 439 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-201ENST00000311943 BCRP11274 1271 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 OTOP1Q7RTM1 612 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 ZNF444Q8N0Y2 327 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-201ENST00000311943 PROCA1Q8NCQ7 364 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-201ENST00000311943 SMCR8Q8TEV9 937 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-201ENST00000311943 TMOD4Q9NZQ9 345 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 SGSM2O43147 1006 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 LACTBP83111 547 aaPredicted RBP14.32□□□□□ -0.12
SCFD1-201ENST00000311943 ALX1Q15699 326 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 USP17L2Q6R6M4 530 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 TRIM47Q96LD4 638 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 RBPJLQ9UBG7 517 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
SCFD1-201ENST00000311943 C19orf81C9J6K1 198 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 CCDC17Q96LX7 622 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 PAGR1Q9BTK6 254 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 ANAPC4Q9UJX5 808 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 GABRQQ9UN88 632 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 TSPY3P0CV98 308 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 TSPY8P0CW00 308 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 HERVK_113P62684 666 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 PARK7Q99497 189 aaKnown RBP14.31□□□□□ -0.12
SCFD1-201ENST00000311943 MTMR4Q9NYA4 1195 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 BTBD7Q9P203 1132 aa14.31□□□□□ -0.12
SCFD1-201ENST00000311943 TSPY2A6NKD2 308 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 B4E1Z4 1266 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 CNMDO75829 334 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 CYP21A2P08686 494 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 BMP2KLQ5H9B9 411 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 FAM83BQ5T0W9 1011 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 STOX1Q6ZVD7 989 aa14.3□□□□□ -0.12
SCFD1-201ENST00000311943 CTU1Q7Z7A3 348 aaKnown RBP14.3□□□□□ -0.12
SCFD1-201ENST00000311943 NEDD1Q8NHV4 660 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms