RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CNPY2Q9Y2B0 182 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 OPA1O60313 960 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 GOLGA8FQ08AF8 430 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 GOLGA8DPQ0D2H9 430 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 PLCB4Q15147 1175 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 SH2D4BQ5SQS7 431 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 BZW1Q7L1Q6 419 aaKnown RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 UNC5CLQ8IV45 518 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 ANKRD35Q8N283 1001 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 RPS6KC1Q96S38 1066 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 AGTPBP1Q9UPW5 1226 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 CIAO1O76071 339 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 HSPA8P11142 646 aaKnown RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 TNNC1P63316 161 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 PODNQ7Z5L7 613 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 PRIMPOLQ96LW4 560 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 TRPV6Q9H1D0 765 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 NRBP2Q9NSY0 501 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 IMPACTQ9P2X3 320 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 PI4KBQ9UBF8 816 aa3.55□□□□□ -1.84
CLOCK-201ENST00000309964 BZW2Q9Y6E2 419 aaKnown RBP3.55□□□□□ -1.84
CLOCK-201ENST00000309964 CLTCQ00610 1675 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ATP8B3O60423 1300 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 DAPK3O43293 454 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 UBE3CQ15386 1083 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CERKLQ49MI3 558 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 SPOUT1Q5T280 376 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 FOXP4Q8IVH2 680 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 NDUFAF2Q8N183 169 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PRPF38AQ8NAV1 312 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 FAM200AQ8TCP9 573 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 GCNAQ96QF7 691 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 WDR11Q9BZH6 1224 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TRIM7Q9C029 511 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MLXIPQ9HAP2 919 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 HOXC10Q9NYD6 342 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TTF2Q9UNY4 1162 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MAP3K15Q6ZN16 1313 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 HSF2BPO75031 334 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PCCAP05165 728 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 LMNB2Q03252 620 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CALCRLQ16602 461 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 RCSD1Q6JBY9 416 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TBC1D9Q6ZT07 1266 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 GSTA5Q7RTV2 222 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CACTINQ8WUQ7 758 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 COA7Q96BR5 231 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TRIM11Q96F44 468 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 KANSL2Q9H9L4 492 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ARFGAP3Q9NP61 516 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PCDHA12Q9UN75 941 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TMEM94Q12767 1356 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 JCADQ9P266 1359 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PATL2C9JE40 543 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ZWINTO95229 277 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PRIM1P49642 420 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CCT2P78371 535 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PRPF4BQ13523 1007 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 KYAT1Q16773 422 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 FAM89AQ96GI7 184 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CEP63Q96MT8 703 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 GINM1Q9NU53 330 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 EHD2Q9NZN4 543 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MAP3K7O43318 606 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 VAMP4O75379 141 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 APOBRQ0VD83 1088 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 NOLC1Q14978 699 aaKnown RBP eCLIP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MTHFSDQ2M296 383 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ARHGEF16Q5VV41 709 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TTLL6Q8N841 843 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MICAL1Q8TDZ2 1067 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TMEM51Q9NW97 253 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PIM2Q9P1W9 311 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CAMSAP1Q5T5Y3 1602 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PTPRTO14522 1441 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ERVK-7P63135 1459 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CHL1O00533 1208 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CCNT1O60563 726 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ADCY7P51828 1080 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 EVCP57679 992 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 DPP9Q86TI2 863 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 SPC24Q8NBT2 197 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 CCT6BQ92526 530 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PTCH1Q13635 1447 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 E7EVH7 732 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 TTLL1O95922 423 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MARCKSP29966 332 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 RASSF2P50749 326 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 MECOMQ03112 1051 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 SEL1L2Q5TEA6 688 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 GIMAP6Q6P9H5 292 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 C1orf228Q6PIY5 440 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 FASTKD5Q7L8L6 764 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 FAM160B2Q86V87 743 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 HAUS7Q99871 368 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 AMNQ9BXJ7 453 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 ABCC12Q96J65 1359 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 GAS7O60861 476 aa3.54□□□□□ -1.84
CLOCK-201ENST00000309964 PRPF6O94906 941 aaKnown RBP3.54□□□□□ -1.84
CLOCK-201ENST00000309964 XRCC5P13010 732 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms