RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SLC12A7Q9Y666 1083 aa8.15□□□□□ -1.11
PTCD2-201ENST00000308077 DDTLA6NHG4 134 aaPredicted RBP8.14□□□□□ -1.11
PTCD2-201ENST00000308077 GOLGA8AA7E2F4 631 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 FDPSP14324 419 aaKnown RBP8.14□□□□□ -1.11
PTCD2-201ENST00000308077 TNIP1Q15025 636 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 IFIT1BQ5T764 474 aaKnown RBP8.14□□□□□ -1.11
PTCD2-201ENST00000308077 CLEC17AQ6ZS10 378 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 TTC6Q86TZ1 520 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 TMTC2Q8N394 836 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 MTMR14Q8NCE2 650 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 DNAJC18Q9H819 358 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 MTMR6Q9Y217 621 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 BAHCC1Q9P281 2608 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 CLRN2A0PK11 232 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 SHMT1P34896 483 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 KCTD2Q14681 263 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 DLGAP5Q15398 846 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 NTRK3Q16288 839 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 LARP1BQ659C4 914 aaKnown RBP8.14□□□□□ -1.11
PTCD2-201ENST00000308077 ARHGAP27Q6ZUM4 889 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 OGFOD1Q8N543 542 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 TCP11L1Q9NUJ3 509 aa8.14□□□□□ -1.11
PTCD2-201ENST00000308077 ZNF70Q9UC06 446 aaPredicted RBP8.14□□□□□ -1.11
PTCD2-201ENST00000308077 WDR33Q9C0J8 1336 aaKnown RBP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 ATRNL1Q5VV63 1379 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 PLIN4Q96Q06 1357 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 BAG4O95429 457 aaKnown RBP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 EGFRP00533 1210 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 TSPY3P0CV98 308 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 TSPY8P0CW00 308 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 ZSCAN22P10073 491 aaPredicted RBP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 MCM4P33991 863 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 NT5C2P49902 561 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 GMPSP49915 693 aaPredicted RBP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 RCAN1P53805 252 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 ZNF280AP59817 542 aaPredicted RBP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 HMGN5P82970 282 aaKnown RBP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 TROAPQ12815 778 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 ZNF444Q8N0Y2 327 aaPredicted RBP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTCD2-201ENST00000308077 EHD4Q9H223 541 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 MYOZ2Q9NPC6 264 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 SERPINB13Q9UIV8 391 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 STXBP5LQ9Y2K9 1186 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 TCHHQ07283 1943 aa8.13□□□□□ -1.11
PTCD2-201ENST00000308077 VPS37CA5D8V6 355 aaPredicted RBP8.12□□□□□ -1.11
PTCD2-201ENST00000308077 FAM196BA6NMK8 535 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 TCP10L2B9ZVM9 353 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 WNT10BO00744 389 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 CPLX1O14810 134 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 DHX16O60231 1041 aaKnown RBP8.12□□□□□ -1.11
PTCD2-201ENST00000308077 ENTPD3O75355 529 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 F13A1P00488 732 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 HLA-DOAP06340 250 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 AKR1B1P15121 316 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 RPS12P25398 132 aaKnown RBP8.12□□□□□ -1.11
PTCD2-201ENST00000308077 EIF6P56537 245 aaKnown RBP8.12□□□□□ -1.11
PTCD2-201ENST00000308077 RTN1Q16799 776 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 NBPF9Q3BBW0 867 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 SYNE3Q6ZMZ3 975 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 NEDD1Q8NHV4 660 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 NUP133Q8WUM0 1156 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 ANKS1AQ92625 1134 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 PHKBQ93100 1093 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 DHX36Q9H2U1 1008 aaKnown RBP8.12□□□□□ -1.11
PTCD2-201ENST00000308077 ZNF287Q9HBT7 754 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 SWAP70Q9UH65 585 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 MYH6P13533 1939 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 MYH15Q9Y2K3 1946 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 CASP8AP2Q9UKL3 1982 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 UBE2Q2LH0YL09 131 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 LMNB1P20700 586 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 PDCP20941 246 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 FOSBP53539 338 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 CATIPQ7Z7H3 387 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 DGKHQ86XP1 1220 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 MICALL2Q8IY33 904 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 FAM184AQ8NB25 1140 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 FANCBQ8NB91 859 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 CHMP4CQ96CF2 233 aa8.12□□□□□ -1.11
PTCD2-201ENST00000308077 IGKV6D-41A0A0C4DH26 115 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 DDAH1O94760 285 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 IFNAR1P17181 557 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 NOVP48745 357 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 SHROOM1Q2M3G4 852 aaPredicted RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 NBPF11Q86T75 865 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 ZSCAN29Q8IWY8 852 aaPredicted RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 CMTR1Q8N1G2 835 aaKnown RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 DPF2Q92785 391 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 CEP95Q96GE4 821 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 GBP4Q96PP9 640 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 VEZTQ9HBM0 779 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 TMOD2Q9NZR1 351 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 ORC3Q9UBD5 711 aaPredicted RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 PI4KBQ9UBF8 816 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms