RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 DCUN1D2Q6PH85 259 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 SLC4A7Q9Y6M7 1214 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 PNMA6EA0A0J9YXQ4 647 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 ZKSCAN8Q15776 578 aaPredicted RBP14.01□□□□□ -0.17
USP38-201ENST00000307017 E2F4Q16254 413 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 DNAJC17Q9NVM6 304 aaKnown RBP14.01□□□□□ -0.17
USP38-201ENST00000307017 NFE2L3Q9Y4A8 694 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 BIRC2Q13490 618 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 GPR161Q8N6U8 529 aaKnown RBP14.01□□□□□ -0.17
USP38-201ENST00000307017 PAGR1Q9BTK6 254 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 PYCARDQ9ULZ3 195 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 CD19P15391 556 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 SPAG1Q07617 926 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 IDI1Q13907 227 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 TTBK2Q6IQ55 1244 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 NACA2Q9H009 215 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 NLRP12P59046 1061 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 SMC5Q8IY18 1101 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 OGFOD1Q8N543 542 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 GBP5Q96PP8 586 aa14.01□□□□□ -0.17
USP38-201ENST00000307017 ZBBXA8MT70 800 aa14□□□□□ -0.17
USP38-201ENST00000307017 MAP2K2P36507 400 aa14□□□□□ -0.17
USP38-201ENST00000307017 PEX26Q7Z412 305 aa14□□□□□ -0.17
USP38-201ENST00000307017 PDCD7Q8N8D1 485 aaKnown RBP14□□□□□ -0.17
USP38-201ENST00000307017 PDZD8Q8NEN9 1154 aa14□□□□□ -0.17
USP38-201ENST00000307017 SNX29Q8TEQ0 813 aa14□□□□□ -0.17
USP38-201ENST00000307017 POMGNT1Q8WZA1 660 aa14□□□□□ -0.17
USP38-201ENST00000307017 IFT74Q96LB3 600 aa14□□□□□ -0.17
USP38-201ENST00000307017 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
USP38-201ENST00000307017 UBXN2AP68543 259 aa14□□□□□ -0.17
USP38-201ENST00000307017 CACNB1Q02641 598 aaPredicted RBP14□□□□□ -0.17
USP38-201ENST00000307017 METTL13Q8N6R0 699 aa14□□□□□ -0.17
USP38-201ENST00000307017 NLRP3Q96P20 1036 aa14□□□□□ -0.17
USP38-201ENST00000307017 POC1B-GALNT4F8VUJ3 575 aa14□□□□□ -0.17
USP38-201ENST00000307017 ALDH3A1P30838 453 aa14□□□□□ -0.17
USP38-201ENST00000307017 CCDC14Q49A88 953 aa14□□□□□ -0.17
USP38-201ENST00000307017 HERC4Q5GLZ8 1057 aaPredicted RBP14□□□□□ -0.17
USP38-201ENST00000307017 KSR2Q6VAB6 950 aa14□□□□□ -0.17
USP38-201ENST00000307017 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
USP38-201ENST00000307017 MAPKAPK5Q8IW41 473 aa14□□□□□ -0.17
USP38-201ENST00000307017 GPKOWQ92917 476 aaPredicted RBP eCLIP14□□□□□ -0.17
USP38-201ENST00000307017 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
USP38-201ENST00000307017 UBN2Q6ZU65 1347 aa14□□□□□ -0.17
USP38-201ENST00000307017 A0A1B0GUA9 196 aa14□□□□□ -0.17
USP38-201ENST00000307017 ITGA6P23229 1130 aa14□□□□□ -0.17
USP38-201ENST00000307017 TBK1Q9UHD2 729 aa14□□□□□ -0.17
USP38-201ENST00000307017 CFBP00751 764 aa14□□□□□ -0.17
USP38-201ENST00000307017 SLC7A5Q01650 507 aa14□□□□□ -0.17
USP38-201ENST00000307017 KLHL30Q0D2K2 578 aa14□□□□□ -0.17
USP38-201ENST00000307017 TGFBRAP1Q8WUH2 860 aa14□□□□□ -0.17
USP38-201ENST00000307017 F5H423 210 aaPredicted RBP14□□□□□ -0.17
USP38-201ENST00000307017 PRXQ9BXM0 1461 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 TTC38Q5R3I4 469 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 SKA2Q8WVK7 121 aaPredicted RBP13.99□□□□□ -0.17
USP38-201ENST00000307017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.99□□□□□ -0.177e-6■■■■■ 33.3
USP38-201ENST00000307017 TRPA1O75762 1119 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 STX2P32856 288 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 FAM102BQ5T8I3 360 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 UBL4BQ8N7F7 174 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 KRT12Q99456 494 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 MYCP01106 439 aaPredicted RBP13.99□□□□□ -0.17
USP38-201ENST00000307017 NCBP1Q09161 790 aaKnown RBP13.99□□□□□ -0.17
USP38-201ENST00000307017 TRIP13Q15645 432 aaPredicted RBP13.99□□□□□ -0.17
USP38-201ENST00000307017 DDX12PQ92771 950 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 KIFAP3Q92845 792 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 PPIP5K1Q6PFW1 1433 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 I3L4J1 428 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 USP37Q86T82 979 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 GRAMD1CQ8IYS0 662 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 ANKFY1Q9P2R3 1169 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 CALUO43852 315 aaPredicted RBP13.99□□□□□ -0.17
USP38-201ENST00000307017 PALM2Q8IXS6 379 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 XAGE2Q96GT9 111 aa13.99□□□□□ -0.17
USP38-201ENST00000307017 SLCO1A2P46721 670 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 IFIH1Q9BYX4 1025 aaKnown RBP13.98□□□□□ -0.17
USP38-201ENST00000307017 LMBRD1Q9NUN5 540 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
USP38-201ENST00000307017 EPRSP07814 1512 aaKnown RBP13.98□□□□□ -0.17
USP38-201ENST00000307017 MAGEA1P43355 309 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 CALCRLQ16602 461 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 ME3Q16798 604 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 GPT2Q8TD30 523 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 MED10Q9BTT4 135 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 TMTC4Q5T4D3 741 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 RSPH3Q86UC2 560 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 TMTC2Q8N394 836 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 PGBD1Q96JS3 809 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 CETN3O15182 167 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 SLC52A1Q9NWF4 448 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 CLIC4Q9Y696 253 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 GPAA1O43292 621 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 UFL1O94874 794 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 TNNI1P19237 187 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 STRN3Q13033 797 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 SPOUT1Q5T280 376 aaKnown RBP13.98□□□□□ -0.17
USP38-201ENST00000307017 DIS3L2Q8IYB7 885 aaKnown RBP13.98□□□□□ -0.17
USP38-201ENST00000307017 MCUQ8NE86 351 aa13.98□□□□□ -0.17
USP38-201ENST00000307017 THRAP3Q9Y2W1 955 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms