RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 TAF1CQ15572 869 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 IMMTQ16891 758 aaKnown RBP13.05□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PROCA1Q8NCQ7 364 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 RNF41Q9H4P4 317 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 TSKSQ9UJT2 592 aa13.05□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 CEP350Q5VT06 3117 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 BTBD19C9JJ37 291 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 HSPA8P11142 646 aaKnown RBP13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 RASA1P20936 1047 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 BACE1P56817 501 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 JAG1P78504 1218 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 ATP2B2Q01814 1243 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 ZYXQ15942 572 aaKnown RBP13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 RRP12Q5JTH9 1297 aaKnown RBP13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 FAM43AQ8N2R8 423 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 IL25Q9H293 177 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 ZFYVE28Q9HCC9 887 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PDHXO00330 501 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 TBC1D8O95759 1140 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 SH3D19Q5HYK7 790 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PPP4R3BQ5MIZ7 849 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 USP17L2Q6R6M4 530 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PARK7Q99497 189 aaKnown RBP13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PTPN18Q99952 460 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 PARP14Q460N5 1801 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 MGAMO43451 1857 aa13.03□□□□□ -0.32
CSPG4P2Y-201ENST00000306853 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 GUCY1A2P33402 732 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 LBX1P52954 281 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 CRHR2Q13324 411 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 STAG1Q8WVM7 1258 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 CFHR5Q9BXR6 569 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 KIAA1683Q9H0B3 1180 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 SLC45A1Q9Y2W3 748 aa13.02□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 ORC4O43929 436 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 OSBPP22059 807 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 NT5C2P49902 561 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 TFAP4Q01664 338 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 ACER1Q8TDN7 264 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 SMCR8Q8TEV9 937 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 CNNM2Q9H8M5 875 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 GOPCQ9HD26 462 aa13.01□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 RAD21O60216 631 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 PTH1RQ03431 593 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 TRDNQ13061 729 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 DGKZQ13574 1117 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 MOGSQ13724 837 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 TREML2Q5T2D2 321 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 GPAT2Q6NUI2 795 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 NEDD1Q8NHV4 660 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 ESR2Q92731 530 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 CEP95Q96GE4 821 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 C12orf42Q96LP6 360 aa13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 NEDD4P46934 1319 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 GPR25O00155 361 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 TLR2O60603 784 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 TTLL1O95922 423 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 VCAM1P19320 739 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 NOM1Q5C9Z4 860 aaKnown RBP12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 LPAR1Q92633 364 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 KRT23Q9C075 422 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 VCPKMTQ9H867 229 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 NYAP2Q9P242 653 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 TMX2Q9Y320 296 aa12.99□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 IGKV6D-41A0A0C4DH26 115 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 A0A1W2PRG0 241 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 FKTNO75072 461 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 FGRP09769 529 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 CYP2C8P10632 490 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 RNF20Q5VTR2 975 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 RALYLQ86SE5 291 aaKnown RBP12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 IQCA1Q86XH1 822 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 MAP4K1Q92918 833 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 TANGO6Q9C0B7 1094 aa12.98□□□□□ -0.33
CSPG4P2Y-201ENST00000306853 LSG1Q9H089 658 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms