RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 CEP290O15078 2479 aa20.11■□□□□ 0.81
TRAPPC1-201ENST00000303731 HMGCRP04035 888 aa20.1■□□□□ 0.81
TRAPPC1-201ENST00000303731 U2AF1L4Q8WU68 220 aaKnown RBP20.1■□□□□ 0.81
TRAPPC1-201ENST00000303731 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
TRAPPC1-201ENST00000303731 SOCS4Q8WXH5 440 aa20.1■□□□□ 0.81
TRAPPC1-201ENST00000303731 EDC3Q96F86 508 aaKnown RBP20.1■□□□□ 0.81
TRAPPC1-201ENST00000303731 UNC93B1Q9H1C4 597 aa20.1■□□□□ 0.81
TRAPPC1-201ENST00000303731 DCTPP1Q9H773 170 aa20.1■□□□□ 0.81
TRAPPC1-201ENST00000303731 MBD4O95243 580 aa20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 SGPL1O95470 568 aa20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 ERVK-9P63128 1117 aa20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 ERVK-24P63145 666 aa20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 TRMT44Q8IYL2 757 aaKnown RBP20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 ARMT1Q9H993 441 aa20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 ECHDC1Q9NTX5 307 aa20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 GJD2Q9UKL4 321 aa20.09■□□□□ 0.81
TRAPPC1-201ENST00000303731 CCNA1P78396 465 aa20.08■□□□□ 0.81
TRAPPC1-201ENST00000303731 NUDT12Q9BQG2 462 aa20.08■□□□□ 0.81
TRAPPC1-201ENST00000303731 PAK6Q9NQU5 681 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC1-201ENST00000303731 RBPJLQ9UBG7 517 aa20.08■□□□□ 0.81
TRAPPC1-201ENST00000303731 RABGAP1Q9Y3P9 1069 aa20.08■□□□□ 0.81
TRAPPC1-201ENST00000303731 XRCC5P13010 732 aaKnown RBP20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 VCAM1P19320 739 aa20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 ZYXQ15942 572 aaKnown RBP20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 LBX2Q6XYB7 198 aa20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 CATSPERGQ6ZRH7 1159 aa20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 TMEM179Q6ZVK1 233 aa20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 UBE2Q1Q7Z7E8 422 aa20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 TXNRD2Q9NNW7 524 aa20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 BAZ2AQ9UIF9 1905 aaKnown RBP20.07■□□□□ 0.8
TRAPPC1-201ENST00000303731 PLXNB2O15031 1838 aa20.06■□□□□ 0.8
TRAPPC1-201ENST00000303731 MPHOSPH10O00566 681 aaKnown RBP20.06■□□□□ 0.8
TRAPPC1-201ENST00000303731 SMARCA5O60264 1052 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC1-201ENST00000303731 CCDC17Q96LX7 622 aa20.06■□□□□ 0.8
TRAPPC1-201ENST00000303731 PAGR1Q9BTK6 254 aa20.06■□□□□ 0.8
TRAPPC1-201ENST00000303731 GLRX3O76003 335 aaKnown RBP20.05■□□□□ 0.8
TRAPPC1-201ENST00000303731 FARP2O94887 1054 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC1-201ENST00000303731 GUCY1A2P33402 732 aa20.05■□□□□ 0.8
TRAPPC1-201ENST00000303731 SEPT2Q15019 361 aa20.05■□□□□ 0.8
TRAPPC1-201ENST00000303731 ACER1Q8TDN7 264 aa20.05■□□□□ 0.8
TRAPPC1-201ENST00000303731 DEFB118Q96PH6 123 aa20.05■□□□□ 0.8
TRAPPC1-201ENST00000303731 SH2D4AQ9H788 454 aa20.05■□□□□ 0.8
TRAPPC1-201ENST00000303731 RPTORQ8N122 1335 aa20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 TFRCP02786 760 aaKnown RBP20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 LRRFIP1Q32MZ4 808 aaKnown RBP20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 C12orf60Q5U649 245 aa20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 GPR142Q7Z601 462 aa20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 PLEKHH3Q7Z736 793 aa20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 CRISPLD2Q9H0B8 497 aa20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 CWC22Q9HCG8 908 aaKnown RBP20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 HMX1Q9NP08 348 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 SLC4A4Q9Y6R1 1079 aa20.04■□□□□ 0.8
TRAPPC1-201ENST00000303731 PRKAB2O43741 272 aa20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 ZFYP08048 801 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 RGS2P41220 211 aa20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 KBTBD3Q8NAB2 608 aa20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 ANKLE1Q8NAG6 615 aa20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 LPAR1Q92633 364 aa20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 RPAP3Q9H6T3 665 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 ARHGEF10LQ9HCE6 1279 aa20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 ARPP21Q9UBL0 812 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC1-201ENST00000303731 TTC41PQ6P2S7 1318 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 USP17L12C9JPN9 530 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 USP17L21D6R901 530 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 CYP2D6P10635 497 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 CYP2B6P20813 491 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 Q3C1V9 767 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 GIMAP6Q6P9H5 292 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 C16orf86Q6ZW13 317 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 DPF3Q92784 378 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 PUS7LQ9H0K6 701 aaKnown RBP20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 PORCNQ9H237 461 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 HOXC10Q9NYD6 342 aa20.02■□□□□ 0.8
TRAPPC1-201ENST00000303731 ERC2O15083 957 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 ZKSCAN1P17029 563 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 CDK8P49336 464 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 ICA1Q05084 483 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 SLFNL1Q499Z3 407 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 MORN1Q5T089 497 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 SLC44A5Q8NCS7 719 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 TRIB2Q92519 343 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 USP6NLQ92738 828 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 APBA2Q99767 749 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 NR2E3Q9Y5X4 410 aa20.01■□□□□ 0.79
TRAPPC1-201ENST00000303731 A0A1W2PRG0 241 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 SPDYE16A6NNV3 312 aaPredicted RBP20■□□□□ 0.79
TRAPPC1-201ENST00000303731 CNMDO75829 334 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 RRP1P56182 461 aaKnown RBP20■□□□□ 0.79
TRAPPC1-201ENST00000303731 EVX2Q03828 476 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 COG2Q14746 738 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 HABP4Q5JVS0 413 aaKnown RBP20■□□□□ 0.79
TRAPPC1-201ENST00000303731 MAP3K21Q5TCX8 1036 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 POTEEQ6S8J3 1075 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 MB21D1Q8N884 522 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 APPBP2Q92624 585 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 DYNLL2Q96FJ2 89 aa20■□□□□ 0.79
TRAPPC1-201ENST00000303731 TMX2Q9Y320 296 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms