RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 PNMA1Q8ND90 353 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 ANKS1AQ92625 1134 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 DNAJC18Q9H819 358 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 RBM28Q9NW13 759 aaKnown RBP15.13■□□□□ 0.01
CCDC7-202ENST00000302316 DICER1Q9UPY3 1922 aaKnown RBP15.13■□□□□ 0.01
CCDC7-202ENST00000302316 FAM196BA6NMK8 535 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 SLURP2P0DP57 97 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 YBX3P16989 372 aaKnown RBP eCLIP15.13■□□□□ 0.01
CCDC7-202ENST00000302316 IFNAR1P17181 557 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 RBM26Q5T8P6 1007 aaKnown RBP15.13■□□□□ 0.01
CCDC7-202ENST00000302316 MCTP1Q6DN14 999 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
CCDC7-202ENST00000302316 CEP95Q96GE4 821 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 CHAMP1Q96JM3 812 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 CSRNP1Q96S65 589 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 SLC26A6Q9BXS9 759 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 ATP6V1DQ9Y5K8 247 aa15.13■□□□□ 0.01
CCDC7-202ENST00000302316 SRCAPQ6ZRS2 3230 aa15.12■□□□□ 0.01
CCDC7-202ENST00000302316 STK36Q9NRP7 1315 aa15.12■□□□□ 0.01
CCDC7-202ENST00000302316 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
CCDC7-202ENST00000302316 FKBP1CQ5VVH2 108 aa15.12■□□□□ 0.01
CCDC7-202ENST00000302316 FERMT3Q86UX7 667 aa15.12■□□□□ 0.01
CCDC7-202ENST00000302316 FAM151AQ8WW52 585 aa15.12■□□□□ 0.01
CCDC7-202ENST00000302316 CNOT7Q9UIV1 285 aaKnown RBP15.12■□□□□ 0.01
CCDC7-202ENST00000302316 TAOK2Q9UL54 1235 aa15.12■□□□□ 0.01
CCDC7-202ENST00000302316 CNTNAP1P78357 1384 aa15.12■□□□□ 0.01
CCDC7-202ENST00000302316 MPHOSPH10O00566 681 aaKnown RBP15.11■□□□□ 0.01
CCDC7-202ENST00000302316 FMNL1O95466 1100 aaPredicted RBP15.11■□□□□ 0.01
CCDC7-202ENST00000302316 FOXP4Q8IVH2 680 aaPredicted RBP15.11■□□□□ 0.01
CCDC7-202ENST00000302316 TRIM22Q8IYM9 498 aa15.11■□□□□ 0.01
CCDC7-202ENST00000302316 CMTR1Q8N1G2 835 aaKnown RBP15.11■□□□□ 0.01
CCDC7-202ENST00000302316 TMEM47Q9BQJ4 181 aa15.11■□□□□ 0.01
CCDC7-202ENST00000302316 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.11■□□□□ 0.01
CCDC7-202ENST00000302316 EGFRP00533 1210 aa15.11■□□□□ 0.01
CCDC7-202ENST00000302316 CCDC82Q8N4S0 544 aa15.11■□□□□ 0.01
CCDC7-202ENST00000302316 C8orf76Q96K31 380 aa15.11■□□□□ 0.01
CCDC7-202ENST00000302316 CCDC17Q96LX7 622 aa15.11■□□□□ 0.01
CCDC7-202ENST00000302316 SBF1O95248 1867 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 GUCY1B3Q02153 619 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 TBC1D10BQ4KMP7 808 aaPredicted RBP15.1■□□□□ 0.01
CCDC7-202ENST00000302316 SAMD7Q7Z3H4 446 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 FAM83AQ86UY5 434 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 GPC2Q8N158 579 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 ALG1Q9BT22 464 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 MTMR4Q9NYA4 1195 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 RNF181Q9P0P0 153 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 IGKV6D-41A0A0C4DH26 115 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 PLEKHA8P1O95397 391 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 TOP1P11387 765 aaKnown RBP15.1■□□□□ 0.01
CCDC7-202ENST00000302316 KIF5BP33176 963 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 CERKLQ49MI3 558 aaPredicted RBP15.1■□□□□ 0.01
CCDC7-202ENST00000302316 TMTC3Q6ZXV5 915 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 METTL16Q86W50 562 aaKnown RBP15.1■□□□□ 0.01
CCDC7-202ENST00000302316 TMEM39BQ9GZU3 492 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 MTMR7Q9Y216 660 aa15.1■□□□□ 0.01
CCDC7-202ENST00000302316 PTMSP20962 102 aa15.09■□□□□ 0.01
CCDC7-202ENST00000302316 NOVP48745 357 aa15.09■□□□□ 0.01
CCDC7-202ENST00000302316 TNNI2P48788 182 aa15.09■□□□□ 0.01
CCDC7-202ENST00000302316 KIF4BQ2VIQ3 1234 aa15.09■□□□□ 0.01
CCDC7-202ENST00000302316 TATDN1Q6P1N9 297 aa15.09■□□□□ 0.01
CCDC7-202ENST00000302316 CLEC10AQ8IUN9 316 aa15.09■□□□□ 0.01
CCDC7-202ENST00000302316 WASF1Q92558 559 aa15.09■□□□□ 0.01
CCDC7-202ENST00000302316 MAP3K14Q99558 947 aa15.09■□□□□ 0.01
CCDC7-202ENST00000302316 HERC5Q9UII4 1024 aaKnown RBP15.09■□□□□ 0.01
CCDC7-202ENST00000302316 GREB1LQ9C091 1923 aaPredicted RBP15.09■□□□□ 0.01
CCDC7-202ENST00000302316 H7C1D1 291 aa15.08■□□□□ 0.01
CCDC7-202ENST00000302316 DEXIO95424 95 aa15.08■□□□□ 0.01
CCDC7-202ENST00000302316 AKAP17AQ02040 695 aaKnown RBP15.08■□□□□ 0.01
CCDC7-202ENST00000302316 TNFAIP1Q13829 316 aa15.08■□□□□ 0.01
CCDC7-202ENST00000302316 AIFM3Q96NN9 605 aa15.08■□□□□ 0.01
CCDC7-202ENST00000302316 RNF26Q9BY78 433 aaPredicted RBP15.08■□□□□ 0.01
CCDC7-202ENST00000302316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.08■□□□□ 0.01
CCDC7-202ENST00000302316 UBE2Q2LH0YL09 131 aa15.08■□□□□ 0
CCDC7-202ENST00000302316 TTLL1O95922 423 aa15.08■□□□□ 0
CCDC7-202ENST00000302316 RESTQ13127 1097 aa15.08■□□□□ 0
CCDC7-202ENST00000302316 GRM4Q14833 912 aa15.08■□□□□ 0
CCDC7-202ENST00000302316 OTUD7BQ6GQQ9 843 aa15.08■□□□□ 0
CCDC7-202ENST00000302316 FBXO18Q8NFZ0 1043 aa15.08■□□□□ 0
CCDC7-202ENST00000302316 ZSCAN16Q9H4T2 348 aaPredicted RBP15.08■□□□□ 0
CCDC7-202ENST00000302316 GJB4Q9NTQ9 266 aa15.08■□□□□ 0
CCDC7-202ENST00000302316 CNTNAP5Q8WYK1 1306 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 GDF11O95390 407 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
CCDC7-202ENST00000302316 GUCY1A2P33402 732 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 TRIM29Q14134 588 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 PPP4R3BQ5MIZ7 849 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 GPRC5DQ9NZD1 345 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 DNM1Q05193 864 aaKnown RBP15.07■□□□□ 0
CCDC7-202ENST00000302316 FUT2Q10981 343 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 LRRC47Q8N1G4 583 aaKnown RBP15.07■□□□□ 0
CCDC7-202ENST00000302316 SRBD1Q8N5C6 995 aaKnown RBP15.07■□□□□ 0
CCDC7-202ENST00000302316 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 CNPY2Q9Y2B0 182 aa15.07■□□□□ 0
CCDC7-202ENST00000302316 ASTN2O75129 1339 aaPredicted RBP15.06■□□□□ 0
CCDC7-202ENST00000302316 GNAQP50148 359 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 ATP2B2Q01814 1243 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 RASA3Q14644 834 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 ABCB5Q2M3G0 1257 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms