RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 ANKRD13CQ8N6S4 541 aa17.99■□□□□ 0.47
UBXN1-202ENST00000301935 PROCA1Q8NCQ7 364 aaPredicted RBP17.99■□□□□ 0.47
UBXN1-202ENST00000301935 STRBPQ96SI9 672 aaKnown RBP17.99■□□□□ 0.47
UBXN1-202ENST00000301935 OSBPL5Q9H0X9 879 aaPredicted RBP17.99■□□□□ 0.47
UBXN1-202ENST00000301935 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.99■□□□□ 0.47
UBXN1-202ENST00000301935 ANO2Q9NQ90 1003 aa17.99■□□□□ 0.47
UBXN1-202ENST00000301935 PNMA3Q9UL41 463 aa17.99■□□□□ 0.47
UBXN1-202ENST00000301935 ALPK3Q96L96 1907 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 DOCK3Q8IZD9 2030 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 M0R2C6 588 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 MBD4O95243 580 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 MCCP23508 829 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 GIMAP6Q6P9H5 292 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 SEC62Q99442 399 aaKnown RBP17.98■□□□□ 0.47
UBXN1-202ENST00000301935 CRNKL1Q9BZJ0 848 aaKnown RBP17.98■□□□□ 0.47
UBXN1-202ENST00000301935 NACAP1Q9BZK3 213 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 PRO3102Q9H379 93 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 CDK5RAP2Q96SN8 1893 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 FOCADQ5VW36 1801 aa17.98■□□□□ 0.47
UBXN1-202ENST00000301935 PATL2C9JE40 543 aaKnown RBP17.97■□□□□ 0.47
UBXN1-202ENST00000301935 ALX1Q15699 326 aa17.97■□□□□ 0.47
UBXN1-202ENST00000301935 ZNF589Q86UQ0 364 aaPredicted RBP17.97■□□□□ 0.47
UBXN1-202ENST00000301935 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
UBXN1-202ENST00000301935 COA7Q96BR5 231 aa17.97■□□□□ 0.47
UBXN1-202ENST00000301935 DDRGK1Q96HY6 314 aa17.97■□□□□ 0.47
UBXN1-202ENST00000301935 RIOK1Q9BRS2 568 aaKnown RBP17.97■□□□□ 0.47
UBXN1-202ENST00000301935 USP26Q9BXU7 913 aa17.97■□□□□ 0.47
UBXN1-202ENST00000301935 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
UBXN1-202ENST00000301935 LSG1Q9H089 658 aaKnown RBP17.97■□□□□ 0.47
UBXN1-202ENST00000301935 PAK6Q9NQU5 681 aaPredicted RBP17.97■□□□□ 0.47
UBXN1-202ENST00000301935 NR2E3Q9Y5X4 410 aa17.97■□□□□ 0.47
UBXN1-202ENST00000301935 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
UBXN1-202ENST00000301935 CHGBP05060 677 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 HSPD1P10809 573 aaKnown RBP17.96■□□□□ 0.47
UBXN1-202ENST00000301935 CAPN2P17655 700 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 SPP2Q13103 211 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 SLFNL1Q499Z3 407 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 ADGRA1Q86SQ6 560 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 MIGA1Q8NAN2 632 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 ZNF280CQ8ND82 737 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 DEFB118Q96PH6 123 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 ATP8A2Q9NTI2 1148 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 TAOK2Q9UL54 1235 aa17.96■□□□□ 0.47
UBXN1-202ENST00000301935 SEC24BO95487 1268 aa17.95■□□□□ 0.46
UBXN1-202ENST00000301935 CAP2P40123 477 aa17.95■□□□□ 0.46
UBXN1-202ENST00000301935 RNF20Q5VTR2 975 aa17.95■□□□□ 0.46
UBXN1-202ENST00000301935 CRISPLD2Q9H0B8 497 aa17.95■□□□□ 0.46
UBXN1-202ENST00000301935 ARMT1Q9H993 441 aa17.95■□□□□ 0.46
UBXN1-202ENST00000301935 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.46
UBXN1-202ENST00000301935 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
UBXN1-202ENST00000301935 ZMYM6O95789 1325 aa17.95■□□□□ 0.46
UBXN1-202ENST00000301935 GCLCP48506 637 aaPredicted RBP17.94■□□□□ 0.46
UBXN1-202ENST00000301935 HMGCS2P54868 508 aa17.94■□□□□ 0.46
UBXN1-202ENST00000301935 PABPC4Q13310 644 aaKnown RBP eCLIP17.94■□□□□ 0.464e-8■■□□□ 13.2
UBXN1-202ENST00000301935 RRP1BQ14684 758 aaKnown RBP17.94■□□□□ 0.46
UBXN1-202ENST00000301935 CCDC129Q6ZRS4 1044 aa17.94■□□□□ 0.46
UBXN1-202ENST00000301935 LCORLQ8N3X6 602 aa17.94■□□□□ 0.46
UBXN1-202ENST00000301935 IL25Q9H293 177 aa17.94■□□□□ 0.46
UBXN1-202ENST00000301935 HERC5Q9UII4 1024 aaKnown RBP17.94■□□□□ 0.46
UBXN1-202ENST00000301935 SLC4A4Q9Y6R1 1079 aa17.94■□□□□ 0.46
UBXN1-202ENST00000301935 TFRCP02786 760 aaKnown RBP17.93■□□□□ 0.46
UBXN1-202ENST00000301935 APPP05067 770 aa17.93■□□□□ 0.46
UBXN1-202ENST00000301935 SH3D19Q5HYK7 790 aa17.93■□□□□ 0.46
UBXN1-202ENST00000301935 TEX11Q8IYF3 940 aa17.93■□□□□ 0.46
UBXN1-202ENST00000301935 IL27Q8NEV9 243 aa17.93■□□□□ 0.46
UBXN1-202ENST00000301935 C22orf23Q9BZE7 217 aa17.93■□□□□ 0.46
UBXN1-202ENST00000301935 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.93■□□□□ 0.46
UBXN1-202ENST00000301935 AS3MTQ9HBK9 375 aa17.93■□□□□ 0.46
UBXN1-202ENST00000301935 DDX60LQ5H9U9 1706 aaKnown RBP17.92■□□□□ 0.46
UBXN1-202ENST00000301935 USP17L5A8MUK1 530 aa17.92■□□□□ 0.46
UBXN1-202ENST00000301935 GSG1L2A8MUP6 293 aa17.92■□□□□ 0.46
UBXN1-202ENST00000301935 EVI5O60447 810 aa17.92■□□□□ 0.46
UBXN1-202ENST00000301935 HMGCRP04035 888 aa17.92■□□□□ 0.46
UBXN1-202ENST00000301935 ANAPC15P60006 121 aa17.92■□□□□ 0.46
UBXN1-202ENST00000301935 DYNLL1P63167 89 aaKnown RBP17.92■□□□□ 0.46
UBXN1-202ENST00000301935 PTH1RQ03431 593 aa17.92■□□□□ 0.46
UBXN1-202ENST00000301935 SH3RF3Q8TEJ3 882 aaPredicted RBP17.92■□□□□ 0.46
UBXN1-202ENST00000301935 ASCC2Q9H1I8 757 aaPredicted RBP17.92■□□□□ 0.46
UBXN1-202ENST00000301935 A0A1W2PPC1 479 aa17.91■□□□□ 0.46
UBXN1-202ENST00000301935 ZKSCAN1P17029 563 aaPredicted RBP17.91■□□□□ 0.46
UBXN1-202ENST00000301935 USP5P45974 858 aa17.91■□□□□ 0.46
UBXN1-202ENST00000301935 RBM25P49756 843 aaKnown RBP17.91■□□□□ 0.46
UBXN1-202ENST00000301935 AMOTL1Q8IY63 956 aa17.91■□□□□ 0.46
UBXN1-202ENST00000301935 IFNL3Q8IZI9 196 aa17.91■□□□□ 0.46
UBXN1-202ENST00000301935 PAWRQ96IZ0 340 aaKnown RBP17.91■□□□□ 0.46
UBXN1-202ENST00000301935 NAPBQ9H115 298 aa17.91■□□□□ 0.46
UBXN1-202ENST00000301935 DHX36Q9H2U1 1008 aaKnown RBP17.91■□□□□ 0.46
UBXN1-202ENST00000301935 RBM8AQ9Y5S9 174 aaKnown RBP17.91■□□□□ 0.46
UBXN1-202ENST00000301935 FGAP02671 866 aa17.9■□□□□ 0.46
UBXN1-202ENST00000301935 HSPA4P34932 840 aa17.9■□□□□ 0.46
UBXN1-202ENST00000301935 NECTIN1Q15223 517 aa17.9■□□□□ 0.46
UBXN1-202ENST00000301935 IMMTQ16891 758 aaKnown RBP17.9■□□□□ 0.46
UBXN1-202ENST00000301935 VPS53Q5VIR6 699 aa17.9■□□□□ 0.46
UBXN1-202ENST00000301935 DIS3LQ8TF46 1054 aaKnown RBP17.9■□□□□ 0.46
UBXN1-202ENST00000301935 TBC1D32Q96NH3 1257 aa17.9■□□□□ 0.46
UBXN1-202ENST00000301935 PI4KBQ9UBF8 816 aa17.9■□□□□ 0.46
UBXN1-202ENST00000301935 MORF4L1Q9UBU8 362 aa17.9■□□□□ 0.46
UBXN1-202ENST00000301935 LAMA3Q16787 3333 aa17.9■□□□□ 0.46
UBXN1-202ENST00000301935 TDO2P48775 406 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms