RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 TUBBP07437 444 aa17.97■□□□□ 0.47
CACNB3-201ENST00000301050 CDC27P30260 824 aa17.97■□□□□ 0.47
CACNB3-201ENST00000301050 HELBQ8NG08 1087 aaPredicted RBP17.97■□□□□ 0.47
CACNB3-201ENST00000301050 SPEF2Q9C093 1822 aa17.97■□□□□ 0.47
CACNB3-201ENST00000301050 VPS72Q15906 364 aa17.96■□□□□ 0.47
CACNB3-201ENST00000301050 SYNE3Q6ZMZ3 975 aa17.96■□□□□ 0.47
CACNB3-201ENST00000301050 VGLL2Q8N8G2 317 aa17.96■□□□□ 0.47
CACNB3-201ENST00000301050 CTCFLQ8NI51 663 aaPredicted RBP17.96■□□□□ 0.47
CACNB3-201ENST00000301050 SHOX2O60902 331 aaPredicted RBP17.96■□□□□ 0.47
CACNB3-201ENST00000301050 USP8P40818 1118 aa17.96■□□□□ 0.47
CACNB3-201ENST00000301050 WDR93Q6P2C0 686 aa17.96■□□□□ 0.47
CACNB3-201ENST00000301050 SLC35F6Q8N357 371 aa17.96■□□□□ 0.47
CACNB3-201ENST00000301050 LINC00116Q8NCU8 138 aa17.96■□□□□ 0.47
CACNB3-201ENST00000301050 SMARCC1Q92922 1105 aaPredicted RBP17.96■□□□□ 0.47
CACNB3-201ENST00000301050 C8orf76Q96K31 380 aa17.96■□□□□ 0.47
CACNB3-201ENST00000301050 NIP7Q9Y221 180 aaKnown RBP eCLIP17.96■□□□□ 0.47
CACNB3-201ENST00000301050 BMP6P22004 513 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 SMIM5Q71RC9 77 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 FOXP4Q8IVH2 680 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-201ENST00000301050 RIN2Q8WYP3 895 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-201ENST00000301050 HPSEQ9Y251 543 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 EBAG9O00559 213 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 WHAMMP3Q1A5X7 153 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 OSBP2Q969R2 916 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 ZNF274Q96GC6 653 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-201ENST00000301050 SEC31BQ9NQW1 1179 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 HPCAL4Q9UM19 191 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 COL5A3P25940 1745 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-201ENST00000301050 KIF28PB7ZC32 967 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 MCAMP43121 646 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 CHST3Q7LGC8 479 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 BRAPQ7Z569 592 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 METTL16Q86W50 562 aaKnown RBP17.95■□□□□ 0.46
CACNB3-201ENST00000301050 GJB4Q9NTQ9 266 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 RAI14Q9P0K7 980 aa17.95■□□□□ 0.46
CACNB3-201ENST00000301050 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-201ENST00000301050 ZC3H4Q9UPT8 1303 aaKnown RBP17.94■□□□□ 0.46
CACNB3-201ENST00000301050 LAMA4Q16363 1823 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 AKR1B15C9JRZ8 316 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-201ENST00000301050 HSPD1P10809 573 aaKnown RBP17.94■□□□□ 0.46
CACNB3-201ENST00000301050 ZNF18P17022 549 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 WASHC4Q2M389 1173 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 FAM182BQ5T319 152 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 PANX2Q96RD6 677 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 KAT14Q9H8E8 782 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 PCDHA5Q9Y5H7 936 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 PDE8BO95263 885 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 SLC39A14Q15043 492 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 SHC4Q6S5L8 630 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 CDC5LQ99459 802 aaKnown RBP17.94■□□□□ 0.46
CACNB3-201ENST00000301050 NFE2L3Q9Y4A8 694 aa17.94■□□□□ 0.46
CACNB3-201ENST00000301050 DDX60Q8IY21 1712 aaKnown RBP17.93■□□□□ 0.46
CACNB3-201ENST00000301050 IRAK1P51617 712 aa17.93■□□□□ 0.46
CACNB3-201ENST00000301050 RPAINQ86UA6 219 aa17.93■□□□□ 0.46
CACNB3-201ENST00000301050 DSCC1Q9BVC3 393 aa17.93■□□□□ 0.46
CACNB3-201ENST00000301050 LRP5O75197 1615 aa17.93■□□□□ 0.46
CACNB3-201ENST00000301050 SNAP23O00161 211 aa17.93■□□□□ 0.46
CACNB3-201ENST00000301050 NTSR2O95665 410 aa17.93■□□□□ 0.46
CACNB3-201ENST00000301050 CNPY4Q8N129 248 aa17.93■□□□□ 0.46
CACNB3-201ENST00000301050 FAM212AQ96EL1 285 aa17.93■□□□□ 0.46
CACNB3-201ENST00000301050 NAPGQ99747 312 aaPredicted RBP17.93■□□□□ 0.46
CACNB3-201ENST00000301050 INPP5BP32019 993 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 FMR1Q06787 632 aaKnown RBP eCLIP17.92■□□□□ 0.46
CACNB3-201ENST00000301050 ABL1P00519 1130 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 PHKA1P46020 1223 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 PARP10Q53GL7 1025 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 RASGRP2Q7LDG7 609 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 EHD4Q9H223 541 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 KCNG1Q9UIX4 513 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 USP21Q9UK80 565 aa17.92■□□□□ 0.46
CACNB3-201ENST00000301050 TDO2P48775 406 aa17.91■□□□□ 0.46
CACNB3-201ENST00000301050 AKAP17AQ02040 695 aaKnown RBP17.91■□□□□ 0.46
CACNB3-201ENST00000301050 NR1I3Q14994 352 aa17.91■□□□□ 0.46
CACNB3-201ENST00000301050 LONRF3Q496Y0 759 aa17.91■□□□□ 0.46
CACNB3-201ENST00000301050 NCAPH2Q6IBW4 605 aa17.91■□□□□ 0.46
CACNB3-201ENST00000301050 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
CACNB3-201ENST00000301050 GGCXP38435 758 aa17.91■□□□□ 0.46
CACNB3-201ENST00000301050 STIM1Q13586 685 aa17.91■□□□□ 0.46
CACNB3-201ENST00000301050 TRMT44Q8IYL2 757 aaKnown RBP17.91■□□□□ 0.46
CACNB3-201ENST00000301050 FAM76AQ8TAV0 307 aa17.91■□□□□ 0.46
CACNB3-201ENST00000301050 ABCC12Q96J65 1359 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 E7EWF7 191 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 KIF23Q02241 960 aaPredicted RBP17.9■□□□□ 0.46
CACNB3-201ENST00000301050 CCDC102BQ68D86 513 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 PRPF38AQ8NAV1 312 aaKnown RBP17.9■□□□□ 0.46
CACNB3-201ENST00000301050 CCDC148Q8NFR7 591 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 CPLX3Q8WVH0 158 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 JPH2Q9BR39 696 aaPredicted RBP17.9■□□□□ 0.46
CACNB3-201ENST00000301050 NAA15Q9BXJ9 866 aaKnown RBP17.9■□□□□ 0.46
CACNB3-201ENST00000301050 PUS7LQ9H0K6 701 aaKnown RBP17.9■□□□□ 0.46
CACNB3-201ENST00000301050 RABEP2Q9H5N1 569 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 GPHNQ9NQX3 736 aaPredicted RBP17.9■□□□□ 0.46
CACNB3-201ENST00000301050 MROH5Q6ZUA9 1318 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 BCORQ6W2J9 1755 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 FOXN1O15353 648 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 SATB1Q01826 763 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 RBL2Q08999 1139 aa17.9■□□□□ 0.46
CACNB3-201ENST00000301050 PUM3Q15397 648 aaKnown RBP17.9■□□□□ 0.46
CACNB3-201ENST00000301050 TICAM2Q86XR7 235 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms