RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CCDC122Q5T0U0 273 aa16.24■□□□□ 0.19
CDT1-201ENST00000301019 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
CDT1-201ENST00000301019 TEX11Q8IYF3 940 aa16.24■□□□□ 0.19
CDT1-201ENST00000301019 LGR6Q9HBX8 967 aa16.24■□□□□ 0.19
CDT1-201ENST00000301019 GCFC2P16383 781 aaKnown RBP16.23■□□□□ 0.19
CDT1-201ENST00000301019 RBM5P52756 815 aaKnown RBP eCLIP16.23■□□□□ 0.19
CDT1-201ENST00000301019 VPS37DQ86XT2 251 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
CDT1-201ENST00000301019 DCCP43146 1447 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 SBNO1A3KN83 1393 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 ZSCAN5CA6NGD5 496 aaPredicted RBP16.23■□□□□ 0.19
CDT1-201ENST00000301019 N4BP3O15049 544 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 MYL6BP14649 208 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 FNTAP49354 379 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 TBC1D8BQ0IIM8 1120 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 TFCP2Q12800 502 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 TTMPQ5BVD1 217 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 DBNLQ9UJU6 430 aaKnown RBP16.23■□□□□ 0.19
CDT1-201ENST00000301019 MPHOSPH10O00566 681 aaKnown RBP16.23■□□□□ 0.19
CDT1-201ENST00000301019 CAND2O75155 1236 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 KRT9P35527 623 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 MICAL1Q8TDZ2 1067 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 RIPOR2Q9Y4F9 1068 aa16.23■□□□□ 0.19
CDT1-201ENST00000301019 GNAT3A8MTJ3 354 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 JAKMIP2Q96AA8 810 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 LRRC1Q9BTT6 524 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 YIPF3Q9GZM5 350 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 PIK3C2AO00443 1686 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 MST1RQ04912 1400 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 ZC3H4Q9UPT8 1303 aaKnown RBP16.22■□□□□ 0.19
CDT1-201ENST00000301019 GYPCP04921 128 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 PTPROQ16827 1216 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 L3MBTL1Q9Y468 752 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 SAR1BQ9Y6B6 198 aa16.22■□□□□ 0.19
CDT1-201ENST00000301019 MYO1EQ12965 1108 aa16.21■□□□□ 0.19
CDT1-201ENST00000301019 NNTQ13423 1086 aa16.21■□□□□ 0.19
CDT1-201ENST00000301019 WHAMMP3Q1A5X7 153 aa16.21■□□□□ 0.19
CDT1-201ENST00000301019 WASHC4Q2M389 1173 aa16.21■□□□□ 0.19
CDT1-201ENST00000301019 KIAA1328Q86T90 577 aa16.21■□□□□ 0.19
CDT1-201ENST00000301019 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
CDT1-201ENST00000301019 ALG1Q9BT22 464 aa16.21■□□□□ 0.19
CDT1-201ENST00000301019 NAP1L1P55209 391 aaKnown RBP16.21■□□□□ 0.19
CDT1-201ENST00000301019 KIF23Q02241 960 aaPredicted RBP16.21■□□□□ 0.19
CDT1-201ENST00000301019 NAA35Q5VZE5 725 aa16.21■□□□□ 0.19
CDT1-201ENST00000301019 PNMA8AQ86V59 439 aaPredicted RBP16.21■□□□□ 0.19
CDT1-201ENST00000301019 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.19
CDT1-201ENST00000301019 INHBEP58166 350 aa16.21■□□□□ 0.18
CDT1-201ENST00000301019 TIMM10P62072 90 aa16.21■□□□□ 0.18
CDT1-201ENST00000301019 POSTNQ15063 836 aa16.21■□□□□ 0.18
CDT1-201ENST00000301019 CHADLQ6NUI6 762 aa16.21■□□□□ 0.18
CDT1-201ENST00000301019 ARHGEF25Q86VW2 580 aa16.21■□□□□ 0.18
CDT1-201ENST00000301019 POLR3EQ9NVU0 708 aa16.21■□□□□ 0.18
CDT1-201ENST00000301019 TUBE1Q9UJT0 475 aa16.21■□□□□ 0.18
CDT1-201ENST00000301019 MFAP3LO75121 409 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 NUTM2AQ8IVF1 878 aaPredicted RBP16.2■□□□□ 0.18
CDT1-201ENST00000301019 FAM167BQ9BTA0 163 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 YEATS4O95619 227 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 IDEP14735 1019 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 EZRP15311 586 aaKnown RBP16.2■□□□□ 0.18
CDT1-201ENST00000301019 ARHGAP25P42331 645 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 FKBP4Q02790 459 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDT1-201ENST00000301019 KCNB1Q14721 858 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 NR1I3Q14994 352 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 SNCBQ16143 134 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 THEMIS2Q5TEJ8 643 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 BLZF1Q9H2G9 400 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 GGT7Q9UJ14 662 aa16.2■□□□□ 0.18
CDT1-201ENST00000301019 CD44P16070 742 aaKnown RBP16.19■□□□□ 0.18
CDT1-201ENST00000301019 SLC39A14Q15043 492 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 EPHA10Q5JZY3 1008 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 TTC39AQ5SRH9 613 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 CCNI2Q6ZMN8 369 aaPredicted RBP16.19■□□□□ 0.18
CDT1-201ENST00000301019 TCP11Q8WWU5 503 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 LLPHQ9BRT6 129 aaKnown RBP16.19■□□□□ 0.18
CDT1-201ENST00000301019 INCENPQ9NQS7 918 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 TRDNQ13061 729 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 CCDC181Q5TID7 509 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 MPRIPQ6WCQ1 1025 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 MAATS1Q7Z4T9 603 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 FAM228AQ86W67 206 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 TPX2Q9ULW0 747 aaKnown RBP16.19■□□□□ 0.18
CDT1-201ENST00000301019 ZNF609O15014 1411 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 PREPLQ4J6C6 727 aaPredicted RBP16.19■□□□□ 0.18
CDT1-201ENST00000301019 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 CPSF2Q9P2I0 782 aaKnown RBP16.19■□□□□ 0.18
CDT1-201ENST00000301019 MED23Q9ULK4 1368 aa16.19■□□□□ 0.18
CDT1-201ENST00000301019 TMOD1P28289 359 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 LSP1P33241 339 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 AARSP49588 968 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDT1-201ENST00000301019 CCDC121Q6ZUS5 278 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 OR2W6PQ8NHA6 318 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 ZNF473Q8WTR7 871 aaKnown RBP16.18■□□□□ 0.18
CDT1-201ENST00000301019 CCDC43Q96MW1 224 aaKnown RBP16.18■□□□□ 0.18
CDT1-201ENST00000301019 CTNND2Q9UQB3 1225 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 A0A1B0GUA9 196 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 PRC1O43663 620 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms