RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
COL6A2-201ENST00000300527 TMTC1Q8IUR5 882 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 ANKRD20A12PQ8NF67 263 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 NAA15Q9BXJ9 866 aaKnown RBP16.56■□□□□ 0.24
COL6A2-201ENST00000300527 MMP1P03956 469 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 FBXW10Q5XX13 1052 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 CYP26C1Q6V0L0 522 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 LY9Q9HBG7 655 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 MED4Q9NPJ6 270 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
COL6A2-201ENST00000300527 ABHD10Q9NUJ1 306 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 CPDO75976 1380 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 GOLGA6CA6NDK9 693 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 GOLGA6DP0CG33 693 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 MCAMP43121 646 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 TDO2P48775 406 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 C2orf54Q08AI8 447 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 DPYDQ12882 1025 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 RILPL1Q5EBL4 403 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 FAM76AQ8TAV0 307 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 GOLGA6AQ9NYA3 693 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 N4BP2Q86UW6 1770 aaPredicted RBP16.55■□□□□ 0.24
COL6A2-201ENST00000300527 H0YHG0 523 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 NTRK3Q16288 839 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 LDHAL6AQ6ZMR3 332 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 IFNL2Q8IZJ0 200 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 CABLES1Q8TDN4 633 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 ARMT1Q9H993 441 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 PIH1D3Q9NQM4 214 aaKnown RBP16.55■□□□□ 0.24
COL6A2-201ENST00000300527 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
COL6A2-201ENST00000300527 ERICH2A1L162 156 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 SYF2O95926 243 aaKnown RBP16.54■□□□□ 0.24
COL6A2-201ENST00000300527 ERCC5P28715 1186 aaPredicted RBP16.54■□□□□ 0.24
COL6A2-201ENST00000300527 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL6A2-201ENST00000300527 TADA2BQ86TJ2 420 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 PAGE5Q96GU1 130 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 CTAGE1Q96RT6 745 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 PLIN2Q99541 437 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 KAT14Q9H8E8 782 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 EPN1Q9Y6I3 576 aaPredicted RBP16.54■□□□□ 0.24
COL6A2-201ENST00000300527 TRIM75PA6NK02 468 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 SNAP23O00161 211 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 ERLIN2O94905 339 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 IFIT5Q13325 482 aaKnown RBP16.54■□□□□ 0.24
COL6A2-201ENST00000300527 KANK3Q6NY19 840 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 BCAS4Q8TDM0 211 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 MINDY4BA8MYZ0 360 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 EBAG9O00559 213 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 MYBL2P10244 700 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 ARHGAP25P42331 645 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 SARSP49591 514 aaKnown RBP16.54■□□□□ 0.24
COL6A2-201ENST00000300527 WASF1Q92558 559 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 HPCAL4Q9UM19 191 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 SAR1BQ9Y6B6 198 aa16.54■□□□□ 0.24
COL6A2-201ENST00000300527 PRKAB2O43741 272 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 WTAPQ15007 396 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 IGDCC4Q8TDY8 1250 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 FAM107BQ9H098 131 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 MBD4O95243 580 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 PPARAQ07869 468 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
COL6A2-201ENST00000300527 GPR108Q9NPR9 543 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 CEP131Q9UPN4 1083 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 LAMA4Q16363 1823 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 GOLGA6BA6NDN3 693 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 ZEB2O60315 1214 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 COPB1P53618 953 aaKnown RBP16.53■□□□□ 0.24
COL6A2-201ENST00000300527 GNGT1P63211 74 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 CYP27A1Q02318 531 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 LRP10Q7Z4F1 713 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 MIGA1Q8NAN2 632 aa16.53■□□□□ 0.24
COL6A2-201ENST00000300527 IPO7O95373 1038 aaKnown RBP16.52■□□□□ 0.24
COL6A2-201ENST00000300527 GUCY2CP25092 1073 aa16.52■□□□□ 0.24
COL6A2-201ENST00000300527 ATP1A2P50993 1020 aa16.52■□□□□ 0.24
COL6A2-201ENST00000300527 USP14P54578 494 aa16.52■□□□□ 0.24
COL6A2-201ENST00000300527 SLC7A5Q01650 507 aa16.52■□□□□ 0.24
COL6A2-201ENST00000300527 APTXQ7Z2E3 356 aaKnown RBP16.52■□□□□ 0.24
COL6A2-201ENST00000300527 DHX37Q8IY37 1157 aaKnown RBP16.52■□□□□ 0.24
COL6A2-201ENST00000300527 TRIML1Q8N9V2 468 aa16.52■□□□□ 0.24
COL6A2-201ENST00000300527 TMEM87BQ96K49 555 aa16.52■□□□□ 0.24
COL6A2-201ENST00000300527 SRPRBQ9Y5M8 271 aaKnown RBP16.52■□□□□ 0.24
COL6A2-201ENST00000300527 TRIM49BA6NDI0 452 aa16.52■□□□□ 0.23
COL6A2-201ENST00000300527 NDUFA10O95299 355 aa16.52■□□□□ 0.23
COL6A2-201ENST00000300527 FMNL1O95466 1100 aaPredicted RBP16.52■□□□□ 0.23
COL6A2-201ENST00000300527 EIF5P55010 431 aaKnown RBP16.52■□□□□ 0.23
COL6A2-201ENST00000300527 MFSD6Q6ZSS7 791 aa16.52■□□□□ 0.23
COL6A2-201ENST00000300527 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.23
COL6A2-201ENST00000300527 JAKMIP2Q96AA8 810 aa16.52■□□□□ 0.23
COL6A2-201ENST00000300527 RUFY1Q96T51 708 aa16.52■□□□□ 0.23
COL6A2-201ENST00000300527 SELENOOQ9BVL4 669 aa16.52■□□□□ 0.23
COL6A2-201ENST00000300527 FAM237AA0A1B0GTK4 181 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 KCNJ18B7U540 433 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 KCNJ12Q14500 433 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 EARS2Q5JPH6 523 aaKnown RBP16.51■□□□□ 0.23
COL6A2-201ENST00000300527 KCTD16Q68DU8 428 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms