RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 YTHDC2Q9H6S0 1430 aaKnown RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 A0A087WUV0 522 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 H7C1D1 291 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 GNA14O95837 355 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 MORC3Q14149 939 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 PUM3Q15397 648 aaKnown RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 LIN9Q5TKA1 542 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 TCHPQ9BT92 498 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 ARMT1Q9H993 441 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 KCNJ14Q9UNX9 436 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 TRPM2O94759 1503 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 GUCY2FP51841 1108 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 FAM207AQ9NSI2 230 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 RTEL1Q9NZ71 1219 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 KLHL14Q9P2G3 628 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 CLGNO14967 610 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 CCT5P48643 541 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 TPD52P55327 224 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 SNCBQ16143 134 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 CCDC105Q8IYK2 499 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 MPHOSPH6Q99547 160 aaKnown RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 ANKRD2Q9GZV1 360 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 SSX2IPQ9Y2D8 614 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 EPN1Q9Y6I3 576 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 CD2BP2O95400 341 aaKnown RBP12.22□□□□□ -0.45
PBRM1-201ENST00000296302 TXKP42681 527 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 EFCC1Q9HA90 598 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 ATP1A2P50993 1020 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 NDUFA8P51970 172 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 WDR44Q5JSH3 913 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 CABP7Q86V35 215 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 CHAMP1Q96JM3 812 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 MAK16Q9BXY0 300 aaKnown RBP12.22□□□□□ -0.45
PBRM1-201ENST00000296302 BLZF1Q9H2G9 400 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 AMFRQ9UKV5 643 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 CASQ2O14958 399 aaPredicted RBP12.22□□□□□ -0.45
PBRM1-201ENST00000296302 LUC7L3O95232 432 aaKnown RBP12.22□□□□□ -0.45
PBRM1-201ENST00000296302 LDHBP07195 334 aaKnown RBP12.22□□□□□ -0.45
PBRM1-201ENST00000296302 STX2P32856 288 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 GCKRQ14397 625 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 ANKRD20A3Q5VUR7 823 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 MYL10Q9BUA6 226 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 LSG1Q9H089 658 aaKnown RBP12.22□□□□□ -0.45
PBRM1-201ENST00000296302 CTTNBP2Q8WZ74 1663 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 ZNF521Q96K83 1311 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
PBRM1-201ENST00000296302 PICALMQ13492 652 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 HERC4Q5GLZ8 1057 aaPredicted RBP12.22□□□□□ -0.45
PBRM1-201ENST00000296302 PHLDB3Q6NSJ2 640 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 SNX29Q8TEQ0 813 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 SETDB2Q96T68 719 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
PBRM1-201ENST00000296302 WDR62O43379 1518 aa12.21□□□□□ -0.45
PBRM1-201ENST00000296302 A0A0D9SFI3 127 aa12.21□□□□□ -0.45
PBRM1-201ENST00000296302 SEC31AO94979 1220 aaKnown RBP12.21□□□□□ -0.45
PBRM1-201ENST00000296302 GAS8O95995 478 aa12.21□□□□□ -0.45
PBRM1-201ENST00000296302 ZNF790Q6PG37 636 aa12.21□□□□□ -0.45
PBRM1-201ENST00000296302 USP44Q9H0E7 712 aa12.21□□□□□ -0.45
PBRM1-201ENST00000296302 KRT5P13647 590 aa12.21□□□□□ -0.45
PBRM1-201ENST00000296302 KRT15P19012 456 aa12.21□□□□□ -0.45
PBRM1-201ENST00000296302 HSPA1LP34931 641 aa12.21□□□□□ -0.45
PBRM1-201ENST00000296302 HGSO14964 777 aaPredicted RBP12.21□□□□□ -0.46
PBRM1-201ENST00000296302 LGSNQ5TDP6 509 aa12.21□□□□□ -0.46
PBRM1-201ENST00000296302 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.46
PBRM1-201ENST00000296302 BANK1Q8NDB2 785 aa12.21□□□□□ -0.46
PBRM1-201ENST00000296302 STAMQ92783 540 aa12.21□□□□□ -0.46
PBRM1-201ENST00000296302 GBP5Q96PP8 586 aa12.21□□□□□ -0.46
PBRM1-201ENST00000296302 NYXQ9GZU5 481 aa12.21□□□□□ -0.46
PBRM1-201ENST00000296302 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.46
PBRM1-201ENST00000296302 I3L4J1 428 aa12.21□□□□□ -0.46
PBRM1-201ENST00000296302 SETSIPP0DME0 302 aa12.21□□□□□ -0.46
PBRM1-201ENST00000296302 ZNF853P0CG23 659 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 TROVE2P10155 538 aaKnown RBP eCLIP12.2□□□□□ -0.46
PBRM1-201ENST00000296302 ST5P78524 1137 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 PLS1Q14651 629 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 WDR78Q5VTH9 848 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 BCRP11274 1271 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 ITGA6P23229 1130 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 CLCN6P51797 869 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 MUM1Q2TAK8 710 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 CCDC170Q8IYT3 715 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 MAP4K1Q92918 833 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 PPP1R1BQ9UD71 204 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-201ENST00000296302 STK38LQ9Y2H1 464 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 ZMYM6O95789 1325 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 KRIT1O00522 736 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-201ENST00000296302 TERF2Q15554 542 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 P3H4Q92791 437 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 TACO1Q9BSH4 297 aaKnown RBP12.2□□□□□ -0.46
PBRM1-201ENST00000296302 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 NLRC4Q9NPP4 1024 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-201ENST00000296302 USH1CQ9Y6N9 552 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 TBC1D31Q96DN5 1066 aa12.2□□□□□ -0.46
PBRM1-201ENST00000296302 KCNK3O14649 394 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms