RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 HABP4Q5JVS0 413 aaKnown RBP13.74□□□□□ -0.21
SLX4-201ENST00000294008 KCNG4Q8TDN1 519 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 IPO11Q9UI26 975 aaKnown RBP13.73□□□□□ -0.21
SLX4-201ENST00000294008 RRP9O43818 475 aaKnown RBP13.73□□□□□ -0.21
SLX4-201ENST00000294008 TPH2Q8IWU9 490 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 DCPSQ96C86 337 aaKnown RBP13.73□□□□□ -0.21
SLX4-201ENST00000294008 COG4Q9H9E3 785 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 PARP2Q9UGN5 583 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 GOLGA8CPA6NN73 597 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 SERPINB6P35237 376 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 ANKRD20A3Q5VUR7 823 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 DPP8Q6V1X1 898 aaPredicted RBP13.73□□□□□ -0.21
SLX4-201ENST00000294008 FAM186BQ8IYM0 893 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 MRPS27Q92552 414 aaKnown RBP13.73□□□□□ -0.21
SLX4-201ENST00000294008 HLA-DPA1P20036 260 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 TTC6Q86TZ1 520 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 SRPK1Q96SB4 655 aaKnown RBP13.73□□□□□ -0.21
SLX4-201ENST00000294008 MAD1L1Q9Y6D9 718 aa13.73□□□□□ -0.21
SLX4-201ENST00000294008 CEP128Q6ZU80 1094 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 DPP9Q86TI2 863 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 KCTD17Q8N5Z5 321 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 GTPBP10A4D1E9 387 aaKnown RBP13.72□□□□□ -0.21
SLX4-201ENST00000294008 ATF7P17544 494 aaPredicted RBP13.72□□□□□ -0.21
SLX4-201ENST00000294008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
SLX4-201ENST00000294008 ATP6V0A1Q93050 837 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 ZC3H12BQ5HYM0 836 aaKnown RBP13.72□□□□□ -0.21
SLX4-201ENST00000294008 PIK3AP1Q6ZUJ8 805 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 FTOQ9C0B1 505 aaKnown RBP eCLIP13.72□□□□□ -0.21
SLX4-201ENST00000294008 EMILIN1Q9Y6C2 1016 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 HMGB1P1B2RPK0 211 aaPredicted RBP13.72□□□□□ -0.21
SLX4-201ENST00000294008 LZICQ8WZA0 190 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 ZMAT2Q96NC0 199 aaKnown RBP13.72□□□□□ -0.21
SLX4-201ENST00000294008 CHPF2Q9P2E5 772 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 PAXBP1Q9Y5B6 917 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 PLEKHH1Q9ULM0 1364 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 IRS4O14654 1257 aaPredicted RBP13.72□□□□□ -0.21
SLX4-201ENST00000294008 TSNAXIP1Q2TAA8 658 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 KRT222Q8N1A0 295 aa13.72□□□□□ -0.21
SLX4-201ENST00000294008 LMBR1LQ6UX01 489 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 MAP3K7O43318 606 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 CEP104O60308 925 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 COPS6Q7L5N1 327 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 SULF1Q8IWU6 871 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 SMAP1Q8IYB5 467 aaPredicted RBP13.71□□□□□ -0.21
SLX4-201ENST00000294008 CPSF3Q9UKF6 684 aaKnown RBP13.71□□□□□ -0.21
SLX4-201ENST00000294008 ORC6Q9Y5N6 252 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 DKC1O60832 514 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLX4-201ENST00000294008 PRPSAP1Q14558 356 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 ZFYVE19Q96K21 471 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 SLC8A2Q9UPR5 921 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 AKNAQ7Z591 1439 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 APBA3O96018 575 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 SOX5P35711 763 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 ARHGAP24Q8N264 748 aa13.71□□□□□ -0.21
SLX4-201ENST00000294008 TSR3Q9UJK0 312 aaKnown RBP13.71□□□□□ -0.21
SLX4-201ENST00000294008 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.22
SLX4-201ENST00000294008 ERBINQ96RT1 1412 aa13.71□□□□□ -0.22
SLX4-201ENST00000294008 TTBK2Q6IQ55 1244 aa13.71□□□□□ -0.22
SLX4-201ENST00000294008 BTN2A2Q8WVV5 523 aa13.71□□□□□ -0.22
SLX4-201ENST00000294008 IGSF3O75054 1194 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 HIF1AQ16665 826 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 MCMDC2Q4G0Z9 681 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 C8orf74Q6P047 294 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 CCDC186Q7Z3E2 898 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 EPHB1P54762 984 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
SLX4-201ENST00000294008 SYT10Q6XYQ8 523 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 NLRX1Q86UT6 975 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 RNF10Q8N5U6 811 aaKnown RBP13.7□□□□□ -0.22
SLX4-201ENST00000294008 ADPGKQ9BRR6 497 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 TTC4O95801 387 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 UBE2HP62256 183 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 TBC1D10BQ4KMP7 808 aaPredicted RBP13.7□□□□□ -0.22
SLX4-201ENST00000294008 DNAJC7Q99615 494 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 PAG1Q9NWQ8 432 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 POLKQ9UBT6 870 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 AKT3Q9Y243 479 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 NSD3Q9BZ95 1437 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 PPFIA4O75335 1185 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 CYP2J2P51589 502 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 FASTKD5Q7L8L6 764 aaKnown RBP13.7□□□□□ -0.22
SLX4-201ENST00000294008 PPHLN1Q8NEY8 458 aaKnown RBP13.7□□□□□ -0.22
SLX4-201ENST00000294008 OTULINQ96BN8 352 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 CEP19Q96LK0 163 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 ZC4H2Q9NQZ6 224 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
SLX4-201ENST00000294008 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 PPIP5K2O43314 1243 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 TNNC2P02585 160 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 ARHGDIAP52565 204 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 VCPP55072 806 aaKnown RBP13.7□□□□□ -0.22
SLX4-201ENST00000294008 TRIM55Q9BYV6 548 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 DISC1Q9NRI5 854 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 BRD4O60885 1362 aaPredicted RBP13.7□□□□□ -0.22
SLX4-201ENST00000294008 PTK2BQ14289 1009 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 ARHGEF6Q15052 776 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 MUM1Q2TAK8 710 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 EXT2Q93063 718 aa13.7□□□□□ -0.22
SLX4-201ENST00000294008 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms