RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 POSTNQ15063 836 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 CDC37L1Q7L3B6 337 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 RDH13Q8NBN7 331 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 QTRT2Q9H974 415 aaKnown RBP19.23■□□□□ 0.67
SHANK1-201ENST00000293441 OTUD6AQ7L8S5 288 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 MIER3Q7Z3K6 550 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 NELFBQ8WX92 580 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 TRIM7Q9C029 511 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 ABCA5Q8WWZ7 1642 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 CD19P15391 556 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 CNGA1P29973 690 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 PPP2R5DQ14738 602 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 FAM102BQ5T8I3 360 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 NAP1L3Q99457 506 aaPredicted RBP19.23■□□□□ 0.67
SHANK1-201ENST00000293441 TAB2Q9NYJ8 693 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.23■□□□□ 0.67
SHANK1-201ENST00000293441 USPL1Q5W0Q7 1092 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 SMC1BQ8NDV3 1235 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 DCPSQ96C86 337 aaKnown RBP19.23■□□□□ 0.67
SHANK1-201ENST00000293441 PPANQ9NQ55 473 aaKnown RBP19.23■□□□□ 0.67
SHANK1-201ENST00000293441 VPS18Q9P253 973 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 LPXNO60711 386 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 ZNF654Q8IZM8 581 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 UBL4BQ8N7F7 174 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 SPC25Q9HBM1 224 aa19.23■□□□□ 0.67
SHANK1-201ENST00000293441 GPR161Q8N6U8 529 aaKnown RBP19.22■□□□□ 0.67
SHANK1-201ENST00000293441 FANCCQ00597 558 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 UTP14CQ5TAP6 766 aaKnown RBP19.22■□□□□ 0.67
SHANK1-201ENST00000293441 TRPC6Q9Y210 931 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 CERKLQ49MI3 558 aaPredicted RBP19.22■□□□□ 0.67
SHANK1-201ENST00000293441 DCUN1D2Q6PH85 259 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 CCT6BQ92526 530 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 ZSCAN10Q96SZ4 725 aaPredicted RBP19.22■□□□□ 0.67
SHANK1-201ENST00000293441 CLSTN2Q9H4D0 955 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 SLC5A4Q9NY91 659 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 STK10O94804 968 aaKnown RBP19.22■□□□□ 0.67
SHANK1-201ENST00000293441 TNNI1P19237 187 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 RFX1P22670 979 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 BTDP43251 543 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 NLRP12P59046 1061 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 CHRNDQ07001 517 aa19.22■□□□□ 0.67
SHANK1-201ENST00000293441 SEC62Q99442 399 aaKnown RBP19.22■□□□□ 0.67
SHANK1-201ENST00000293441 ANO3Q9BYT9 981 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 PLEKHG3A1L390 1219 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 LONRF3Q496Y0 759 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 CPLX4Q7Z7G2 160 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 IL17REQ8NFR9 667 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 GNPTABQ3T906 1256 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 RNF169Q8NCN4 708 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 DEPTORQ8TB45 409 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 CTTNBP2NLQ9P2B4 639 aa19.21■□□□□ 0.67
SHANK1-201ENST00000293441 LRMPQ12912 555 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 IFNL3Q8IZI9 196 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 NUP58Q9BVL2 599 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 NCAPG2Q86XI2 1143 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 MLKLQ8NB16 471 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 TRIM37O94972 964 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 PPP2R3AQ06190 1150 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 ARHGAP44Q17R89 818 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 SLC9C1Q4G0N8 1177 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 LRRC24Q50LG9 513 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 ZNF365Q70YC5 407 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
SHANK1-201ENST00000293441 BCRP11274 1271 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 MYO1AQ9UBC5 1043 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 MLH3Q9UHC1 1453 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 PRR16Q569H4 304 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 HACE1Q8IYU2 909 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 NAPGQ99747 312 aaPredicted RBP19.2■□□□□ 0.66
SHANK1-201ENST00000293441 PSTPIP2Q9H939 334 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 UTP11Q9Y3A2 253 aaKnown RBP19.2■□□□□ 0.66
SHANK1-201ENST00000293441 TSPOAP1O95153 1857 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 TUBB4BP68371 445 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 KIF22Q14807 665 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 DCAF15Q66K64 600 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 ANAPC4Q9UJX5 808 aa19.2■□□□□ 0.66
SHANK1-201ENST00000293441 GOLGA8HP0CJ92 632 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 CRKLP46109 303 aaKnown RBP19.19■□□□□ 0.66
SHANK1-201ENST00000293441 CARD10Q9BWT7 1032 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 TTLL3Q9Y4R7 772 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 ALDH3A1P30838 453 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 SULF1Q8IWU6 871 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 ATP8A2Q9NTI2 1148 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 CFAP74Q9C0B2 1584 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 LOC102724428A0A0B4J2F2 783 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 SIK1P57059 783 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 DISP1Q96F81 1524 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 TECP42680 631 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 CCDC121Q6ZUS5 278 aa19.19■□□□□ 0.66
SHANK1-201ENST00000293441 PPEF1O14829 653 aaPredicted RBP19.18■□□□□ 0.66
SHANK1-201ENST00000293441 ADGBQ8N7X0 1667 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 MAP3K15Q6ZN16 1313 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 CAPN2P17655 700 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 PTPRTO14522 1441 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 POLR2MP0CAP2 368 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 TRIM31Q9BZY9 425 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 CEP170Q5SW79 1584 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 KDM3AQ9Y4C1 1321 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 CYP2J2P51589 502 aa19.18■□□□□ 0.66
SHANK1-201ENST00000293441 KMT5BQ4FZB7 885 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms