RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 RGPD3A6NKT7 1758 aaPredicted RBP17.28■□□□□ 0.36
CCDC116-201ENST00000292779 RGPD4Q7Z3J3 1758 aa17.28■□□□□ 0.36
CCDC116-201ENST00000292779 DLEC1Q9Y238 1755 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 hCG_1642624A0A1W2PR95 340 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 SERPINC1P01008 464 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 AKAP17AQ02040 695 aaKnown RBP17.27■□□□□ 0.36
CCDC116-201ENST00000292779 NCBP1Q09161 790 aaKnown RBP17.27■□□□□ 0.36
CCDC116-201ENST00000292779 POSTNQ15063 836 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 PKN1Q16512 942 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 IFIT1BQ5T764 474 aaKnown RBP17.27■□□□□ 0.36
CCDC116-201ENST00000292779 E4F1Q66K89 784 aaPredicted RBP17.27■□□□□ 0.36
CCDC116-201ENST00000292779 PDCL2Q8N4E4 241 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 NYXQ9GZU5 481 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 FANCLQ9NW38 375 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 SERTAD1Q9UHV2 236 aa17.27■□□□□ 0.36
CCDC116-201ENST00000292779 HOOK1Q9UJC3 728 aaKnown RBP17.27■□□□□ 0.36
CCDC116-201ENST00000292779 SRPRBQ9Y5M8 271 aaKnown RBP17.27■□□□□ 0.36
CCDC116-201ENST00000292779 PRR29P0C7W0 189 aa17.27■□□□□ 0.35
CCDC116-201ENST00000292779 CTR9Q6PD62 1173 aa17.27■□□□□ 0.35
CCDC116-201ENST00000292779 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.35
CCDC116-201ENST00000292779 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.35
CCDC116-201ENST00000292779 MAN1B1Q9UKM7 699 aa17.27■□□□□ 0.35
CCDC116-201ENST00000292779 CEP131Q9UPN4 1083 aa17.27■□□□□ 0.35
CCDC116-201ENST00000292779 FAM205CA6NFA0 338 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 PLEKHA8P1O95397 391 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 ADRA2BP18089 450 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 DDR1Q08345 913 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 FUT2Q10981 343 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 RGL2O15211 777 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 CBFA2T2O43439 604 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 MECOMQ03112 1051 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 DHX8Q14562 1220 aaKnown RBP17.26■□□□□ 0.35
CCDC116-201ENST00000292779 SYCP1Q15431 976 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 CFAP100Q494V2 611 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 PPP4R3BQ5MIZ7 849 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 USP49Q70CQ1 688 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 PDILTQ8N807 584 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 PDGFDQ9GZP0 370 aaPredicted RBP17.26■□□□□ 0.35
CCDC116-201ENST00000292779 CSRNP2Q9H175 543 aa17.26■□□□□ 0.35
CCDC116-201ENST00000292779 USP17L12C9JPN9 530 aa17.25■□□□□ 0.35
CCDC116-201ENST00000292779 USP17L21D6R901 530 aa17.25■□□□□ 0.35
CCDC116-201ENST00000292779 FGRP09769 529 aa17.25■□□□□ 0.35
CCDC116-201ENST00000292779 XBP1P17861 261 aa17.25■□□□□ 0.35
CCDC116-201ENST00000292779 EVX2Q03828 476 aa17.25■□□□□ 0.35
CCDC116-201ENST00000292779 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
CCDC116-201ENST00000292779 GRAMD1CQ8IYS0 662 aa17.25■□□□□ 0.35
CCDC116-201ENST00000292779 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
CCDC116-201ENST00000292779 V9GY48 417 aaPredicted RBP17.25■□□□□ 0.35
CCDC116-201ENST00000292779 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
CCDC116-201ENST00000292779 TROAPQ12815 778 aa17.24■□□□□ 0.35
CCDC116-201ENST00000292779 NAA30Q147X3 362 aaPredicted RBP17.24■□□□□ 0.35
CCDC116-201ENST00000292779 EARS2Q5JPH6 523 aaKnown RBP17.24■□□□□ 0.35
CCDC116-201ENST00000292779 NT5DC1Q5TFE4 455 aa17.24■□□□□ 0.35
CCDC116-201ENST00000292779 PPP1R13BQ96KQ4 1090 aa17.24■□□□□ 0.35
CCDC116-201ENST00000292779 AATFQ9NY61 560 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCDC116-201ENST00000292779 SEMA3EO15041 775 aa17.24■□□□□ 0.35
CCDC116-201ENST00000292779 PRDX5P30044 214 aa17.24■□□□□ 0.35
CCDC116-201ENST00000292779 TM4SF1P30408 202 aa17.24■□□□□ 0.35
CCDC116-201ENST00000292779 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
CCDC116-201ENST00000292779 KRT2P35908 639 aa17.24■□□□□ 0.35
CCDC116-201ENST00000292779 SARSP49591 514 aaKnown RBP17.24■□□□□ 0.35
CCDC116-201ENST00000292779 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
CCDC116-201ENST00000292779 RBM28Q9NW13 759 aaKnown RBP17.24■□□□□ 0.35
CCDC116-201ENST00000292779 BAZ2BQ9UIF8 2168 aaKnown RBP17.24■□□□□ 0.35
CCDC116-201ENST00000292779 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
CCDC116-201ENST00000292779 TRIM75PA6NK02 468 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 TMEM232C9JQI7 657 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 ACTN4O43707 911 aaKnown RBP17.23■□□□□ 0.35
CCDC116-201ENST00000292779 MYO1BO43795 1136 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 NRDCO43847 1150 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
CCDC116-201ENST00000292779 KCNJ6P48051 423 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 PTPN21Q16825 1174 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 TPTE2Q6XPS3 522 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 VSTM4Q8IW00 320 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 KIF18AQ8NI77 898 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 LAMB1P07942 1786 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 MORC3Q14149 939 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 TXNRD3Q86VQ6 643 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 JAG2Q9Y219 1238 aa17.23■□□□□ 0.35
CCDC116-201ENST00000292779 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCDC116-201ENST00000292779 KIF2AO00139 706 aaPredicted RBP17.22■□□□□ 0.35
CCDC116-201ENST00000292779 CALM1P0DP23 149 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 CALM2P0DP24 149 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 CALM3P0DP25 149 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 FMR1Q06787 632 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC116-201ENST00000292779 MSL1Q68DK7 614 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 DCP1AQ9NPI6 582 aaPredicted RBP17.22■□□□□ 0.35
CCDC116-201ENST00000292779 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 NMT2O60551 498 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 DDAH1O94760 285 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 PRR5LQ6MZQ0 368 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 KANK3Q6NY19 840 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 TMTC3Q6ZXV5 915 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 MLKLQ8NB16 471 aa17.22■□□□□ 0.35
CCDC116-201ENST00000292779 INTS13Q9NVM9 706 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms