RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 KRT9P35527 623 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 ZNF174Q15697 407 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 GSDMBQ8TAX9 411 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 GDAP1L1Q96MZ0 367 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 CBX8Q9HC52 389 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 ADGRB1O14514 1584 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 IQGAP1P46940 1657 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 ALDH1L1O75891 902 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 CPA1P15085 419 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 KRT15P19012 456 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 HNRNPH2P55795 449 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 PDE4DQ08499 809 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 BIRC3Q13489 604 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 TMTC1Q8IUR5 882 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 UBL4BQ8N7F7 174 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 STK38LQ9Y2H1 464 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 FRMD4BQ9Y2L6 1034 aa11.94□□□□□ -0.5
PKNOX1-201ENST00000291547 TTC41PQ6P2S7 1318 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 STX10O60499 249 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 GAS8O95995 478 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 EPB41P11171 864 aaKnown RBP11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 ITIH3Q06033 890 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 TSC1Q92574 1164 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 DCTPP1Q9H773 170 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 KCNH3Q9ULD8 1083 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 RNF113AO15541 343 aaKnown RBP11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 CHMLP26374 656 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 CSGALNACT2Q8N6G5 542 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 USP26Q9BXU7 913 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 PPANQ9NQ55 473 aaKnown RBP11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 SETD1BQ9UPS6 1966 aaKnown RBP11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 BEND3Q5T5X7 828 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 CLSTN2Q9H4D0 955 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 RAD51AP2Q09MP3 1159 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 RILPL1Q5EBL4 403 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 FAM173BQ6P4H8 233 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 EFCAB13Q8IY85 973 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 KIFAP3Q92845 792 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 ZBTB21Q9ULJ3 1066 aa11.93□□□□□ -0.5
PKNOX1-201ENST00000291547 I3L4J1 428 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 HIP1RO75146 1068 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 RNF40O75150 1001 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 CA8P35219 290 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 PICALMQ13492 652 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 GIPC1O14908 333 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 MAGEA9P43362 315 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 PLCD1P51178 756 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 ASIC2Q16515 512 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 SLFNL1Q499Z3 407 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 TBC1D31Q96DN5 1066 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 IMPACTQ9P2X3 320 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 USH1CQ9Y6N9 552 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 F8W031 263 aaPredicted RBP11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 NCBP1Q09161 790 aaKnown RBP11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 MUM1Q2TAK8 710 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 PHLDB3Q6NSJ2 640 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 HAUS7Q99871 368 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 VCX3AQ9NNX9 186 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 MGEA5O60502 916 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 RASSF2P50749 326 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 MTMR3Q13615 1198 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 LETM2Q2VYF4 491 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 WDR44Q5JSH3 913 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 ANO1Q5XXA6 986 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 SLF1Q9BQI6 1058 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 NFE2L3Q9Y4A8 694 aa11.92□□□□□ -0.5
PKNOX1-201ENST00000291547 GNAT2P19087 354 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 CFAP221Q4G0U5 840 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 TRIM68Q6AZZ1 485 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 C8orf58Q8NAV2 365 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 MCM9Q9NXL9 1143 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 CTTNBP2NLQ9P2B4 639 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 MYO1CO00159 1063 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 AFAP1L2Q8N4X5 818 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 MLKLQ8NB16 471 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 FNBP1Q96RU3 617 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 SYNRGQ9UMZ2 1314 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 PPP2R5DQ14738 602 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 GPIHBP1Q8IV16 184 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 MIGA1Q8NAN2 632 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 PEX19P40855 299 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 GNGT1P63211 74 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 LGSNQ5TDP6 509 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 KSR2Q6VAB6 950 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 ANKRD42Q8N9B4 389 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 MGARPQ8TDB4 240 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 WHAMMQ8TF30 809 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 ANKRD7Q92527 254 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 RILPQ96NA2 401 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 ZKSCAN3Q9BRR0 538 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 NUP58Q9BVL2 599 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 TNNQ9UQP3 1299 aa11.91□□□□□ -0.5
PKNOX1-201ENST00000291547 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms