RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 CLIP2Q9UDT6 1046 aa21.94■■□□□ 1.1
SHF-201ENST00000290894 KCNH3Q9ULD8 1083 aa21.94■■□□□ 1.1
SHF-201ENST00000290894 PRPF3O43395 683 aaKnown RBP21.94■■□□□ 1.1
SHF-201ENST00000290894 RILPL1Q5EBL4 403 aa21.94■■□□□ 1.1
SHF-201ENST00000290894 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.94■■□□□ 1.1
SHF-201ENST00000290894 PDILTQ8N807 584 aa21.94■■□□□ 1.1
SHF-201ENST00000290894 RTFDC1Q9BY42 306 aaPredicted RBP21.94■■□□□ 1.1
SHF-201ENST00000290894 CNTNAP5Q8WYK1 1306 aa21.93■■□□□ 1.1
SHF-201ENST00000290894 ADAMTS3O15072 1205 aa21.93■■□□□ 1.1
SHF-201ENST00000290894 DDAH1O94760 285 aa21.93■■□□□ 1.1
SHF-201ENST00000290894 ATP2B4P23634 1241 aa21.93■■□□□ 1.1
SHF-201ENST00000290894 USP49Q70CQ1 688 aa21.93■■□□□ 1.1
SHF-201ENST00000290894 RBM28Q9NW13 759 aaKnown RBP21.93■■□□□ 1.1
SHF-201ENST00000290894 GOLGA6L6A8MZA4 724 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 F8W031 263 aaPredicted RBP21.92■■□□□ 1.1
SHF-201ENST00000290894 CUTAO60888 179 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 RASGRP2Q7LDG7 609 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 PHF20Q9BVI0 1012 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 CALM1P0DP23 149 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 CALM2P0DP24 149 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 CALM3P0DP25 149 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 XBP1P17861 261 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 GSTO1P78417 241 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 PPP2R5BQ15173 497 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 CCDC144BQ3MJ40 725 aa21.92■■□□□ 1.1
SHF-201ENST00000290894 DNTTIP2Q5QJE6 756 aaKnown RBP21.92■■□□□ 1.1
SHF-201ENST00000290894 FBXO2Q9UK22 296 aaPredicted RBP21.92■■□□□ 1.1
SHF-201ENST00000290894 BBOX1O75936 387 aa21.91■■□□□ 1.1
SHF-201ENST00000290894 KRT2P35908 639 aa21.91■■□□□ 1.1
SHF-201ENST00000290894 NOLC1Q14978 699 aaKnown RBP eCLIP21.91■■□□□ 1.1
SHF-201ENST00000290894 STAG2Q8N3U4 1231 aa21.91■■□□□ 1.1
SHF-201ENST00000290894 NAT10Q9H0A0 1025 aaKnown RBP21.91■■□□□ 1.1
SHF-201ENST00000290894 KAT14Q9H8E8 782 aa21.91■■□□□ 1.1
SHF-201ENST00000290894 STX8Q9UNK0 236 aa21.91■■□□□ 1.1
SHF-201ENST00000290894 TSPY3P0CV98 308 aa21.91■■□□□ 1.1
SHF-201ENST00000290894 TSPY8P0CW00 308 aa21.91■■□□□ 1.1
SHF-201ENST00000290894 METTL16Q86W50 562 aaKnown RBP21.91■■□□□ 1.1
SHF-201ENST00000290894 CNNM3Q8NE01 707 aa21.91■■□□□ 1.1
SHF-201ENST00000290894 GTF2IP78347 998 aa21.9■■□□□ 1.1
SHF-201ENST00000290894 PNMA1Q8ND90 353 aa21.9■■□□□ 1.1
SHF-201ENST00000290894 DLEC1Q9Y238 1755 aa21.9■■□□□ 1.1
SHF-201ENST00000290894 IL1R1P14778 569 aa21.9■■□□□ 1.1
SHF-201ENST00000290894 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
SHF-201ENST00000290894 COL23A1Q86Y22 540 aaPredicted RBP21.9■■□□□ 1.1
SHF-201ENST00000290894 TEX11Q8IYF3 940 aa21.9■■□□□ 1.1
SHF-201ENST00000290894 MXD3Q9BW11 206 aa21.9■■□□□ 1.1
SHF-201ENST00000290894 POLR2DO15514 142 aaKnown RBP21.89■■□□□ 1.1
SHF-201ENST00000290894 ARID5BQ14865 1188 aa21.89■■□□□ 1.1
SHF-201ENST00000290894 NPY5RQ15761 445 aa21.89■■□□□ 1.1
SHF-201ENST00000290894 FOXP4Q8IVH2 680 aaPredicted RBP21.89■■□□□ 1.1
SHF-201ENST00000290894 GRAMD1CQ8IYS0 662 aa21.89■■□□□ 1.1
SHF-201ENST00000290894 GPKOWQ92917 476 aaPredicted RBP eCLIP21.89■■□□□ 1.1
SHF-201ENST00000290894 PPEF1O14829 653 aaPredicted RBP21.89■■□□□ 1.09
SHF-201ENST00000290894 LDHCP07864 332 aa21.89■■□□□ 1.09
SHF-201ENST00000290894 PTPREP23469 700 aa21.89■■□□□ 1.09
SHF-201ENST00000290894 NLRP12P59046 1061 aa21.89■■□□□ 1.09
SHF-201ENST00000290894 KRBA2Q6ZNG9 492 aa21.89■■□□□ 1.09
SHF-201ENST00000290894 C15orf52Q6ZUT6 534 aaKnown RBP21.89■■□□□ 1.09
SHF-201ENST00000290894 AMOTL1Q8IY63 956 aa21.89■■□□□ 1.09
SHF-201ENST00000290894 HOXA10P31260 410 aaPredicted RBP21.88■■□□□ 1.09
SHF-201ENST00000290894 PPP4CP60510 307 aa21.88■■□□□ 1.09
SHF-201ENST00000290894 ZNF174Q15697 407 aa21.88■■□□□ 1.09
SHF-201ENST00000290894 ZNF444Q8N0Y2 327 aaPredicted RBP21.88■■□□□ 1.09
SHF-201ENST00000290894 CSRNP2Q9H175 543 aa21.88■■□□□ 1.09
SHF-201ENST00000290894 CPVLQ9H3G5 476 aa21.88■■□□□ 1.09
SHF-201ENST00000290894 APBA3O96018 575 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 GOLGA8HP0CJ92 632 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 FILIP1Q7Z7B0 1213 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 TIGD1Q96MW7 591 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 TRIM75PA6NK02 468 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 SCG2P13521 617 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 NLRP5P59047 1200 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 DOK7Q18PE1 504 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 KIAA1524Q8TCG1 905 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 CRAMP1Q96RY5 1269 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 PCDHA5Q9Y5H7 936 aa21.87■■□□□ 1.09
SHF-201ENST00000290894 RASA1P20936 1047 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 PICALMQ13492 652 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 SARM1Q6SZW1 724 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 PIK3AP1Q6ZUJ8 805 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 EPSTI1Q96J88 318 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 SERTAD1Q9UHV2 236 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 NAV1Q8NEY1 1877 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 FLT1P17948 1338 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 GPR75-ASB3A0A0A6YYF3 556 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 FAM237AA0A1B0GTK4 181 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 PRR29P0C7W0 189 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 LMOD1P29536 600 aaPredicted RBP21.86■■□□□ 1.09
SHF-201ENST00000290894 RBM6P78332 1123 aaKnown RBP21.86■■□□□ 1.09
SHF-201ENST00000290894 CACTINQ8WUQ7 758 aaKnown RBP21.86■■□□□ 1.09
SHF-201ENST00000290894 CDK5RAP2Q96SN8 1893 aa21.86■■□□□ 1.09
SHF-201ENST00000290894 RASGRP4Q8TDF6 673 aa21.85■■□□□ 1.09
SHF-201ENST00000290894 FAM13BQ9NYF5 915 aa21.85■■□□□ 1.09
SHF-201ENST00000290894 RHBDL3P58872 404 aa21.85■■□□□ 1.09
SHF-201ENST00000290894 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.85■■□□□ 1.09
SHF-201ENST00000290894 BRMS1Q9HCU9 246 aa21.85■■□□□ 1.09
SHF-201ENST00000290894 TUBE1Q9UJT0 475 aa21.85■■□□□ 1.09
SHF-201ENST00000290894 SRPRBQ9Y5M8 271 aaKnown RBP21.85■■□□□ 1.09
SHF-201ENST00000290894 CDK8P49336 464 aa21.84■■□□□ 1.09
SHF-201ENST00000290894 DGKHQ86XP1 1220 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms