RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 TPTE2Q6XPS3 522 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 HOMER1Q86YM7 354 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 LINC00116Q8NCU8 138 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 CABP5Q9NP86 173 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 FAM217BQ9NTX9 383 aaPredicted RBP5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 ANAPC4Q9UJX5 808 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 MINPP1Q9UNW1 487 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 HPSEQ9Y251 543 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 NRAPQ86VF7 1730 aa5.55□□□□□ -1.52
PPP1R9A-201ENST00000289495 TOM1O60784 492 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 KIF5BP33176 963 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 GUCY1A2P33402 732 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 SPECC1Q5M775 1068 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 PDCL2Q8N4E4 241 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 KIF18AQ8NI77 898 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 C8orf37Q96NL8 207 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 MAP3K14Q99558 947 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 BCL2L12Q9HB09 334 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 VPS54Q9P1Q0 977 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 ARPP21Q9UBL0 812 aaPredicted RBP5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 TUBE1Q9UJT0 475 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 RTCBQ9Y3I0 505 aaKnown RBP5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 USP17L12C9JPN9 530 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 USP17L21D6R901 530 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 POLR2DO15514 142 aaKnown RBP5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 PTPREP23469 700 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 USP5P45974 858 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 NR5A1Q13285 461 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 ARID5BQ14865 1188 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 C3orf67Q6ZVT6 689 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 NKX2-3Q8TAU0 364 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 CELF1Q92879 486 aaKnown RBP5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 OSBPL5Q9H0X9 879 aaPredicted RBP5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 AATFQ9NY61 560 aaKnown RBP eCLIP5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 TFCP2L1Q9NZI6 479 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 ECM29Q5VYK3 1845 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 NLRP5P59047 1200 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 TBC1D9BQ66K14 1250 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 ENAHQ8N8S7 591 aaPredicted RBP5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 RASSF8Q8NHQ8 419 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 SLC39A7Q92504 469 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 TSC1Q92574 1164 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 CCNL1Q9UK58 526 aaPredicted RBP5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 PCDHA5Q9Y5H7 936 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 RREB1Q92766 1687 aa5.54□□□□□ -1.52
PPP1R9A-201ENST00000289495 CYP2D7A0A087X1C5 515 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 UBE2Q2LH0YL09 131 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 TXLNAP40222 546 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 CCZ1BP86790 482 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 CCZ1P86791 482 aaPredicted RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 LONRF3Q496Y0 759 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 ADGRA1Q86SQ6 560 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 METTL16Q86W50 562 aaKnown RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 TRIML1Q8N9V2 468 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 MLKLQ8NB16 471 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 DHX58Q96C10 678 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 FAM84BQ96KN1 310 aaPredicted RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 RIOK1Q9BRS2 568 aaKnown RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 KAT14Q9H8E8 782 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 ATP8A2Q9NTI2 1148 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 ANKIB1Q9P2G1 1089 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 NARFQ9UHQ1 456 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 SERTAD1Q9UHV2 236 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 BOLA1Q9Y3E2 137 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 PCDHB6Q9Y5E3 794 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 V9GY48 417 aaPredicted RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 BCORQ6W2J9 1755 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 MYH14Q7Z406 1995 aaKnown RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 FAM237AA0A1B0GTK4 181 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 PRPF3O43395 683 aaKnown RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 RPS6KA4O75676 772 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 KCNQ4P56696 695 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 GSTO1P78417 241 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 MECOMQ03112 1051 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 TMED8Q6PL24 325 aaPredicted RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 CCAR2Q8N163 923 aaKnown RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 FERMT2Q96AC1 680 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 MCM9Q9NXL9 1143 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 SRP68Q9UHB9 627 aaKnown RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 FBXO2Q9UK22 296 aaPredicted RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 SRPRBQ9Y5M8 271 aaKnown RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 DUOX1Q9NRD9 1551 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 CICQ96RK0 1608 aaPredicted RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 hCG_1642624A0A1W2PR95 340 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 C2orf72A6NCS6 295 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 RFC4P35249 363 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 SEC23AQ15436 765 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 TTC38Q5R3I4 469 aa5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 PYM1Q9BRP8 204 aaKnown RBP5.53□□□□□ -1.52
PPP1R9A-201ENST00000289495 PDS5AQ29RF7 1337 aaKnown RBP5.52□□□□□ -1.52
PPP1R9A-201ENST00000289495 MYH6P13533 1939 aa5.52□□□□□ -1.53
PPP1R9A-201ENST00000289495 G3V3G9 751 aa5.52□□□□□ -1.53
PPP1R9A-201ENST00000289495 ORC4O43929 436 aa5.52□□□□□ -1.53
PPP1R9A-201ENST00000289495 PLEKHA8P1O95397 391 aa5.52□□□□□ -1.53
PPP1R9A-201ENST00000289495 BAG3O95817 575 aa5.52□□□□□ -1.53
PPP1R9A-201ENST00000289495 LDHBP07195 334 aaKnown RBP5.52□□□□□ -1.53
PPP1R9A-201ENST00000289495 LDHCP07864 332 aa5.52□□□□□ -1.53
PPP1R9A-201ENST00000289495 C7P10643 843 aa5.52□□□□□ -1.53
PPP1R9A-201ENST00000289495 ATP1A3P13637 1013 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms