RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 RCSD1Q6JBY9 416 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 NBPF11Q86T75 865 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 SPICE1Q8N0Z3 855 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 TRPM4Q8TD43 1214 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 DNAJC18Q9H819 358 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 PI4KBQ9UBF8 816 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 SNED1Q8TER0 1413 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 SSRP1Q08945 709 aaKnown RBP11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 TMTC2Q8N394 836 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 AGBL3Q8NEM8 1001 aa11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 ZNF526Q8TF50 670 aaPredicted RBP11.42□□□□□ -0.58
PPP4R1-201ENST00000285124 F13A1P00488 732 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 GH2P01242 217 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 SHMT1P34896 483 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 SLC16A2P36021 539 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 JAG1P78504 1218 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 IKQ13123 557 aaPredicted RBP11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 KIF4BQ2VIQ3 1234 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 ANGEL2Q5VTE6 544 aaKnown RBP11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 SGMS1Q86VZ5 419 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 CERS3Q8IU89 383 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 HACL1Q9UJ83 578 aa11.41□□□□□ -0.58
PPP4R1-201ENST00000285124 MYO3BQ8WXR4 1341 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 FZD9O00144 591 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 PDCP20941 246 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 HDLBPQ00341 1268 aaKnown RBP11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 TROAPQ12815 778 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 VPS54Q9P1Q0 977 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 USP17L5A8MUK1 530 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 SNAP25P60880 206 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 HMGN5P82970 282 aaKnown RBP11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 CCDC96Q2M329 555 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 EAPPQ56P03 285 aaPredicted RBP11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 KCTD1Q719H9 257 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 TRIM22Q8IYM9 498 aa11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 NUP88Q99567 741 aaPredicted RBP11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 DDX49Q9Y6V7 483 aaKnown RBP11.4□□□□□ -0.58
PPP4R1-201ENST00000285124 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.596e-7■■□□□ 11.4
PPP4R1-201ENST00000285124 GADD45BO75293 160 aaPredicted RBP11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 FGRP09769 529 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 FKBP1AP62942 108 aaKnown RBP11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 NBPF12Q5TAG4 269 aaPredicted RBP11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 NEDD1Q8NHV4 660 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 IDI2Q9BXS1 227 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 DEFB129Q9H1M3 183 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 LRRC37AA6NMS7 1700 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 TRAK2O60296 914 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 GABPAQ06546 454 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 TRIM29Q14134 588 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 NTRK3Q16288 839 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 ABCB5Q2M3G0 1257 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 SPDYE2Q495Y8 402 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 TTBK2Q6IQ55 1244 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 SMARCC2Q8TAQ2 1214 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 DHX36Q9H2U1 1008 aaKnown RBP11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 GGA3Q9NZ52 723 aa11.39□□□□□ -0.59
PPP4R1-201ENST00000285124 DOCK2Q92608 1830 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 EEF2P13639 858 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 EVCP57679 992 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 USP48Q86UV5 1035 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 MTMR4Q9NYA4 1195 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 KIF3AQ9Y496 699 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 ADAMTSL1Q8N6G6 1762 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 CCDC196A0A1B0GTZ2 297 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 CDKL5O76039 1030 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 ECE1P42892 770 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 HIRAP54198 1017 aaPredicted RBP11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 KRT40Q6A162 431 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 TMED8Q6PL24 325 aaPredicted RBP11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 LLPHQ9BRT6 129 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 MRIQ9BWK5 157 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 CABP5Q9NP86 173 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
PPP4R1-201ENST00000285124 KLRF2D3W0D1 207 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 PCP11498 1178 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 DGKHQ86XP1 1220 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 FAM151AQ8WW52 585 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 VPS33BQ9H267 617 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 WDR19Q8NEZ3 1342 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 BTBD18B2RXH4 712 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 LMOD1P29536 600 aaPredicted RBP11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 ICA1Q05084 483 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 NR5A1Q13285 461 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 DGKZQ13574 1117 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 FOXP4Q8IVH2 680 aaPredicted RBP11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 ACER1Q8TDN7 264 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 PCNTO95613 3336 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
PPP4R1-201ENST00000285124 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
PPP4R1-201ENST00000285124 HEATR3Q7Z4Q2 680 aa11.36□□□□□ -0.59
PPP4R1-201ENST00000285124 GLIS2Q9BZE0 524 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-201ENST00000285124 GPRC5DQ9NZD1 345 aa11.36□□□□□ -0.59
PPP4R1-201ENST00000285124 KIF28PB7ZC32 967 aa11.36□□□□□ -0.59
PPP4R1-201ENST00000285124 TTLL1O95922 423 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms